RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CYP2C19P33261 490 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 GNALP38405 381 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 ARHGAP25P42331 645 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 CDKN1CP49918 316 aaPredicted RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 TOB1P50616 345 aaPredicted RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 PLCD1P51178 756 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 ZNF135P52742 658 aaPredicted RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 TCF15Q12870 199 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 DAZAP2Q15038 168 aaPredicted RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 BRD3Q15059 726 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 BRDTQ58F21 947 aaPredicted RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 PPP4R3AQ6IN85 833 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 WDR53Q7Z5U6 358 aaPredicted RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 C11orf96Q7Z7L8 435 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 CHSY1Q86X52 802 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 C8orf58Q8NAV2 365 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 NSUN6Q8TEA1 469 aaKnown RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 PNISRQ8TF01 805 aaKnown RBP5.9□□□□□ -1.46
CHD9-220ENST00000569794 MTMR4Q9NYA4 1195 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 CFAP97Q9P2B7 532 aa5.9□□□□□ -1.46
CHD9-220ENST00000569794 CCDC189A1A4V9 331 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 VPS4BO75351 444 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 ONECUT2O95948 504 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 GNAI3P08754 354 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 GNAI1P63096 354 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 SNAPC2Q13487 334 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 PCID2Q5JVF3 399 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 PXDC1Q5TGL8 231 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 MAVSQ7Z434 540 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 DTX2Q86UW9 622 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 CNGA4Q8IV77 575 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 PNLDC1Q8NA58 520 aaKnown RBP5.89□□□□□ -1.47
CHD9-220ENST00000569794 C5orf34Q96MH7 638 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 VRK1Q99986 396 aaPredicted RBP5.89□□□□□ -1.47
CHD9-220ENST00000569794 MAN1C1Q9NR34 630 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 AGAP1Q9UPQ3 857 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 RAD54BQ9Y620 910 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 CACNA1IQ9P0X4 2223 aa5.89□□□□□ -1.47
CHD9-220ENST00000569794 LDHAP00338 332 aaKnown RBP5.88□□□□□ -1.47
CHD9-220ENST00000569794 VIL1P09327 827 aaKnown RBP5.88□□□□□ -1.47
CHD9-220ENST00000569794 PTMSP20962 102 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 LIPAP38571 399 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 CYP4F2P78329 520 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 FOXD4Q12950 439 aaPredicted RBP5.88□□□□□ -1.47
CHD9-220ENST00000569794 PPP2R5AQ15172 486 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 TRIP6Q15654 476 aaKnown RBP5.88□□□□□ -1.47
CHD9-220ENST00000569794 INAVAQ3KP66 663 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 KHDC1Q4VXA5 237 aaKnown RBP5.88□□□□□ -1.47
CHD9-220ENST00000569794 PPP1R32Q7Z5V6 425 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 ZDHHC17Q8IUH5 632 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 SPATA3Q8NHX4 192 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 ASB2Q96Q27 587 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 MAF1Q9H063 256 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 SIK2Q9H0K1 926 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 PDGFCQ9NRA1 345 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 DUSP22Q9NRW4 184 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 GNL3LQ9NVN8 582 aaKnown RBP5.88□□□□□ -1.47
CHD9-220ENST00000569794 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 LRP12Q9Y561 859 aa5.88□□□□□ -1.47
CHD9-220ENST00000569794 KIF20AO95235 890 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 IL6RP08887 468 aaPredicted RBP5.87□□□□□ -1.47
CHD9-220ENST00000569794 GCLCP48506 637 aaPredicted RBP5.87□□□□□ -1.47
CHD9-220ENST00000569794 HOXA4Q00056 320 aaPredicted RBP5.87□□□□□ -1.47
CHD9-220ENST00000569794 ACAP2Q15057 778 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 PGM2L1Q6PCE3 622 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 NAPRTQ6XQN6 538 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 KRT26Q7Z3Y9 468 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 TMTC2Q8N394 836 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 NME8Q8N427 588 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 NELL2Q99435 816 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 MACROD1Q9BQ69 325 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 EBF3Q9H4W6 596 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 SH2B3Q9UQQ2 575 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 AFG3L2Q9Y4W6 797 aa5.87□□□□□ -1.47
CHD9-220ENST00000569794 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 SLC16A3O15427 465 aaKnown RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 TSPAN6O43657 245 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 TLR5O60602 858 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 BCAR3O75815 825 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 ALDH1L1O75891 902 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 RPLP2P05387 115 aaKnown RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 RARBP10826 455 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 CLCN2P51788 898 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 ZRSR2Q15696 482 aaKnown RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 Q4G0T1 1027 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 TREML2Q5T2D2 321 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 SYCP2LQ5T4T6 812 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 C1orf162Q8NEQ5 155 aaPredicted RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 COA7Q96BR5 231 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 NAP1L4Q99733 375 aaKnown RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 TINAGL1Q9GZM7 467 aaPredicted RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 MKS1Q9NXB0 559 aa5.86□□□□□ -1.47
CHD9-220ENST00000569794 CFAP20Q9Y6A4 193 aaKnown RBP5.86□□□□□ -1.47
CHD9-220ENST00000569794 PHLDB1Q86UU1 1377 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 MYMKA6NI61 221 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 ATF3P18847 181 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 CCKARP32238 428 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 IARSP41252 1262 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms