RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PSMC1P62191 440 aaKnown RBP24.89■■□□□ 1.58
RAB40C-212ENST00000569575 DUSP6Q16828 381 aa24.89■■□□□ 1.58
RAB40C-212ENST00000569575 PPP1R2P3Q6NXS1 205 aa24.89■■□□□ 1.58
RAB40C-212ENST00000569575 TRIM72Q6ZMU5 477 aa24.89■■□□□ 1.58
RAB40C-212ENST00000569575 ANKRD52Q8NB46 1076 aa24.89■■□□□ 1.58
RAB40C-212ENST00000569575 SMARCD1Q96GM5 515 aa24.89■■□□□ 1.58
RAB40C-212ENST00000569575 MTMR11A4FU01 709 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 O00370 1275 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 CLASP2O75122 1294 aaKnown RBP24.88■■□□□ 1.57
RAB40C-212ENST00000569575 ATP2C2O75185 946 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 SERPING1P05155 500 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 RPL17P18621 184 aaKnown RBP24.88■■□□□ 1.57
RAB40C-212ENST00000569575 CLCN4P51793 760 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 ARPP19P56211 112 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 RPL10AP62906 217 aaKnown RBP24.88■■□□□ 1.57
RAB40C-212ENST00000569575 PLD1Q13393 1074 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 SLC47A2Q86VL8 602 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 VPS36Q86VN1 386 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 FUKQ8N0W3 1084 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 EPS8L1Q8TE68 723 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 MYLPFQ96A32 169 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 PANX2Q96RD6 677 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 ZNF518BQ9C0D4 1074 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 LHX5Q9H2C1 402 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 PNPLA8Q9NP80 782 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 ABHD10Q9NUJ1 306 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.88■■□□□ 1.57
RAB40C-212ENST00000569575 CEP83Q9Y592 693 aa24.88■■□□□ 1.57
RAB40C-212ENST00000569575 MTCL1Q9Y4B5 1905 aaKnown RBP24.87■■□□□ 1.57
RAB40C-212ENST00000569575 RFXAPO00287 272 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 TRIM66O15016 1216 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 ADAM12O43184 909 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 THAP12O43422 761 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 TGM5O43548 720 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 SETSIPP0DME0 302 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 CDR2Q01850 454 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 CYP27A1Q02318 531 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 TMEM184AQ6ZMB5 413 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 RNF19BQ6ZMZ0 732 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 C12orf29Q8N999 325 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 SLC22A17Q8WUG5 538 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 TMEM209Q96SK2 561 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 MED10Q9BTT4 135 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 B3GNT5Q9BYG0 378 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 CSNK1G1Q9HCP0 422 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 FBXW11Q9UKB1 542 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 MTCH2Q9Y6C9 303 aa24.87■■□□□ 1.57
RAB40C-212ENST00000569575 LSM8O95777 96 aaKnown RBP24.86■■□□□ 1.57
RAB40C-212ENST00000569575 FAM200BP0CF97 657 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 HOXA9P31269 272 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 BCAT1P54687 386 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 SNX16P57768 344 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 ADCY1Q08828 1119 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 KLHL30Q0D2K2 578 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 PPP1R26Q5T8A7 1209 aaPredicted RBP24.86■■□□□ 1.57
RAB40C-212ENST00000569575 SLC2A14Q8TDB8 520 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 STK32AQ8WU08 396 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 C8orf48Q96LL4 319 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 DUSP16Q9BY84 665 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 EHD2Q9NZN4 543 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 TSPAN16Q9UKR8 245 aa24.86■■□□□ 1.57
RAB40C-212ENST00000569575 HCRTO43612 131 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 POU2F2P09086 479 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 OR4Q2P0C623 313 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 HAPLN1P10915 354 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-212ENST00000569575 LIN9Q5TKA1 542 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 CYP26C1Q6V0L0 522 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 FAM35AQ86V20 835 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 PALB2Q86YC2 1186 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 EFHBQ8N7U6 833 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 TC2NQ8N9U0 490 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 KREMEN2Q8NCW0 462 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 TFAP2BQ92481 460 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 DDX1Q92499 740 aaKnown RBP24.85■■□□□ 1.57
RAB40C-212ENST00000569575 CASP10Q92851 521 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 DMAP1Q9NPF5 467 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-212ENST00000569575 CYLDQ9NQC7 956 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 FAM49BQ9NUQ9 324 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 TMLHEQ9NVH6 421 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 DZANK1Q9NVP4 752 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 COMMD8Q9NX08 183 aa24.85■■□□□ 1.57
RAB40C-212ENST00000569575 ABI2Q9NYB9 513 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-212ENST00000569575 NOCTQ9UK39 431 aaKnown RBP24.85■■□□□ 1.57
RAB40C-212ENST00000569575 SSU72P8A0A1W2PR75 194 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 PAPLNO95428 1278 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 HNRNPA1P09651 372 aaKnown RBP eCLIP24.84■■□□□ 1.57
RAB40C-212ENST00000569575 NPR3P17342 541 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 BST2Q10589 180 aaKnown RBP24.84■■□□□ 1.57
RAB40C-212ENST00000569575 PKDCCQ504Y2 493 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 PAQR9Q6ZVX9 377 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 SPATA17Q96L03 361 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 NOX5Q96PH1 765 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 RHOBTB2Q9BYZ6 727 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 PDCL3Q9H2J4 239 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 ZDHHC7Q9NXF8 308 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 ASB3Q9Y575 518 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 PTPRDP23468 1912 aa24.84■■□□□ 1.57
RAB40C-212ENST00000569575 PRRG1O14668 218 aa24.83■■□□□ 1.57
RAB40C-212ENST00000569575 PNMA6AP0CW24 399 aaPredicted RBP24.83■■□□□ 1.57
RAB40C-212ENST00000569575 CCDC130P13994 396 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms