RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ITIH5Q86UX2 942 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 FMNL3Q8IVF7 1028 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 SLC4A11Q8NBS3 891 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 SHC3Q92529 594 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 IQCDQ96DY2 449 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 CEP295NLQ96MC4 621 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 RIPOR3Q96MK2 946 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 NAP1L5Q96NT1 182 aaPredicted RBP9.69□□□□□ -0.86
CHD9-219ENST00000569225 TWNKQ96RR1 684 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 STK33Q9BYT3 514 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 RHOBTB2Q9BYZ6 727 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 PRKD2Q9BZL6 878 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 PIDD1Q9HB75 910 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 TMLHEQ9NVH6 421 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 IFNKQ9P0W0 207 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 SLC27A5Q9Y2P5 690 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 NME7Q9Y5B8 376 aa9.69□□□□□ -0.86
CHD9-219ENST00000569225 CDH23Q9H251 3354 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CCDC195A0A1B0GUA6 201 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 TRIM66O15016 1216 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 VDRP11473 427 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 ANXA13P27216 316 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 LTBRP36941 435 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 BPIFB4P59827 614 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 APBA1Q02410 837 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 TWF1Q12792 350 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 STILQ15468 1287 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 TAF12Q16514 161 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SGO2Q562F6 1265 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 ATAT1Q5SQI0 421 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CACNA2D4Q7Z3S7 1137 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SLC2A14Q8TDB8 520 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CYFIP2Q96F07 1278 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SMARCD1Q96GM5 515 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 MSLNLQ96KJ4 702 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 NECTIN4Q96NY8 510 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SPAG5Q96R06 1193 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 HNRNPABQ99729 332 aaKnown RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 B3GNT5Q9BYG0 378 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 RBSNQ9H1K0 784 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 GANQ9H2C0 597 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 ADAM7Q9H2U9 754 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 FAM49BQ9NUQ9 324 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 EHD2Q9NZN4 543 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 THEGQ9P2T0 379 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CNTN6Q9UQ52 1028 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 FHOD1Q9Y613 1164 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 H3BQ06 376 aaPredicted RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 TEX33O43247 280 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 MED7O43513 233 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 RFPL2O75678 378 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 PAPLNO95428 1278 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 VNN2O95498 520 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 FAM200BP0CF97 657 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CCDC130P13994 396 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 BDNFP23560 247 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CYP2F1P24903 491 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 GRIK1P39086 918 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 MTHFRP42898 656 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 KLK7P49862 253 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 ZNF132P52740 706 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 DLX2Q07687 328 aaPredicted RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 SMAD4Q13485 552 aaKnown RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 DRAP1Q14919 205 aaPredicted RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 LEXMQ3ZCV2 418 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 ARHGAP17Q68EM7 881 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SYCE2Q6PIF2 218 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 TMC5Q6UXY8 1006 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 GPR149Q86SP6 731 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SCN4BQ8IWT1 228 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 C12orf76Q8N812 135 aaPredicted RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 C12orf29Q8N999 325 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 LEMD2Q8NC56 503 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SMRP1Q8NCR6 262 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 SMG7Q92540 1137 aaKnown RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 ZNF512Q96ME7 567 aaPredicted RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 NUP58Q9BVL2 599 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 ZNF518BQ9C0D4 1074 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 DMAP1Q9NPF5 467 aaPredicted RBP9.68□□□□□ -0.86
CHD9-219ENST00000569225 KRT82Q9NSB4 513 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 CEP72Q9P209 647 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 HESX1Q9UBX0 185 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 MYO7AQ13402 2215 aa9.68□□□□□ -0.86
CHD9-219ENST00000569225 VWA8A3KMH1 1905 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 F8VZ95 297 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 CCL16O15467 120 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 AP1G2O75843 785 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 NOL4O94818 638 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 FGF19O95750 216 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 ADORA2BP29275 332 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 STAT1P42224 750 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 PTK2Q05397 1052 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 CLUL1Q15846 466 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms