RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 LRRC45Q96CN5 670 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 TMEM169Q96HH4 297 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 SEPT5Q99719 369 aaPredicted RBP12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 DHX35Q9H5Z1 703 aaKnown RBP12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 DERAQ9Y315 318 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 A0A1W2PQ45 241 aaPredicted RBP12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 A0A1W2PQY0 241 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 MCF2LO15068 1137 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 SART1O43290 800 aaKnown RBP12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 GJB6O95452 261 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 ATF2P15336 505 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 CAPN2P17655 700 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 MAN1A1P33908 653 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 IKBKEQ14164 716 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 MGAT5BQ3V5L5 792 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 DCAF6Q58WW2 860 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 DENND1BQ6P3S1 775 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 NCAPGQ9BPX3 1015 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 MYH15Q9Y2K3 1946 aa12.78□□□□□ -0.36
TMEM170A-205ENST00000568559 MYZAPP0CAP1 466 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 SMTNL2Q2TAL5 461 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 C12orf29Q8N999 325 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 KCND1Q9NSA2 647 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 KRT82Q9NSB4 513 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 TXNDC16Q9P2K2 825 aa12.77□□□□□ -0.36
TMEM170A-205ENST00000568559 ESYT3A0FGR9 886 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 TADA3O75528 432 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 CCDC130P13994 396 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 PLTPP55058 493 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 LMNB2Q03252 620 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 MAPRE1Q15691 268 aaKnown RBP12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 SLC24A5Q71RS6 500 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 PALB2Q86YC2 1186 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 PCDHB18PQ96TA0 734 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 DSEQ9UL01 958 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 HEY1Q9Y5J3 304 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 FAM169AQ9Y6X4 670 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 CREB3O43889 395 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 IQCF3P0C7M6 154 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 GPD1P21695 349 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 CTXN3Q4LDR2 81 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 DARS2Q6PI48 645 aaKnown RBP12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 ADAMTS10Q9H324 1103 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 KAT6AQ92794 2004 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 PTPRJQ12913 1337 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 SCN4AP35499 1836 aa12.77□□□□□ -0.37
TMEM170A-205ENST00000568559 PMM2O15305 246 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 ENPEPQ07075 957 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MARCH8Q5T0T0 291 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 KRT222Q8N1A0 295 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 DBF4BQ8NFT6 615 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 BHMTQ93088 406 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 HAPLN2Q9GZV7 340 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 DDX56Q9NY93 547 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MYH11P35749 1972 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 OPA1O60313 960 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SLCO1A2P46721 670 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SULT1E1P49888 294 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 VPS37BQ9H9H4 285 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MYO7AQ13402 2215 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 GPR32O75388 356 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 CNGA2Q16280 664 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 PAPD7Q5XG87 772 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 TMEM40Q8WWA1 233 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SCLYQ96I15 445 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 GBP1P32455 592 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 TFDP2Q14188 446 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 MEI1Q5TIA1 1274 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SCUBE3Q8IX30 993 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 SIK2Q9H0K1 926 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 RBM12Q9NTZ6 932 aaKnown RBP12.76□□□□□ -0.37
TMEM170A-205ENST00000568559 PSME4Q14997 1843 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 ARL5CA6NH57 179 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms