RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 DPH6Q7L8W6 267 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 LRRC52Q8N7C0 313 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 UBA3Q8TBC4 463 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 RAPGEF5Q92565 580 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 FAM118BQ9BPY3 351 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 PIN4Q9Y237 131 aaKnown RBP19.12■□□□□ 0.65
SMPD3-211ENST00000568373 SNX9Q9Y5X1 595 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 A6NNZ2 444 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 PPEF2O14830 753 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 LRCH4O75427 683 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 RARGP13631 454 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 CYP3A5P20815 502 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 SLC25A11Q02978 314 aaKnown RBP19.11■□□□□ 0.65
SMPD3-211ENST00000568373 TUBB8Q3ZCM7 444 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 TFDP3Q5H9I0 405 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 GLRA4Q5JXX5 417 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 ARFGAP1Q8N6T3 406 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 C18orf25Q96B23 403 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-211ENST00000568373 ACSF2Q96CM8 615 aaPredicted RBP19.11■□□□□ 0.65
SMPD3-211ENST00000568373 SEMA4AQ9H3S1 761 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 TSPAN16Q9UKR8 245 aa19.11■□□□□ 0.65
SMPD3-211ENST00000568373 hCG_1818297A0A087WSY0 165 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 LRRD1A4D1F6 860 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 TNPO2O14787 897 aaKnown RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 ATF2P15336 505 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 CDKN2BP42772 138 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 IRAK1P51617 712 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 INHBEP58166 350 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 STILQ15468 1287 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 TRIP13Q15645 432 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 FSCN1Q16658 493 aaKnown RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 KRT71Q3SY84 523 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 AGBL2Q5U5Z8 902 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 RHBDF2Q6PJF5 856 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 LRRC31Q6UY01 552 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 EMC1Q8N766 993 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 IPO4Q8TEX9 1081 aaKnown RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 MRPL45Q9BRJ2 306 aaKnown RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 ZFYVE28Q9HCC9 887 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 PDCD11Q14690 1871 aaKnown RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 C17orf102A2RUQ5 167 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 LIASO43766 372 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 KRT7P08729 469 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 ATP1A2P50993 1020 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 HADHQ16836 314 aaKnown RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 DRICH1Q6PGQ1 229 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-211ENST00000568373 ZNF365Q70YC5 407 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 CCDC89Q8N998 374 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 C12orf29Q8N999 325 aa19.1■□□□□ 0.65
SMPD3-211ENST00000568373 SLC10A3P09131 477 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 AKAP5P24588 427 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 HOXC8P31273 242 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 ADCY8P40145 1251 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 CRYBB1P53674 252 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-211ENST00000568373 PURAQ00577 322 aaKnown RBP19.09■□□□□ 0.65
SMPD3-211ENST00000568373 CAV1Q03135 178 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 LMNB2Q03252 620 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 SLC29A2Q14542 456 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 C9orf57Q5W0N0 161 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 HOOK3Q86VS8 718 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 APOL6Q9BWW8 343 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 MIS12Q9H081 205 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 UBQLN1Q9UMX0 589 aaKnown RBP19.09■□□□□ 0.65
SMPD3-211ENST00000568373 C3orf70A6NLC5 250 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-211ENST00000568373 SHBGP04278 402 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 GNAT1P11488 350 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 IL1R2P27930 398 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 ITGA8P53708 1063 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 GNGT1P63211 74 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 BYSLQ13895 437 aaKnown RBP19.09■□□□□ 0.65
SMPD3-211ENST00000568373 ACAP1Q15027 740 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 FAM102AQ5T9C2 384 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-211ENST00000568373 TRAIPQ9BWF2 469 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 LRRC4CQ9HCJ2 640 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 AAASQ9NRG9 546 aa19.09■□□□□ 0.65
SMPD3-211ENST00000568373 GRIN2DO15399 1336 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 RIPK2O43353 540 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 PFKMP08237 780 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 AKR1A1P14550 325 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 KLRC2P26717 231 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 HNRNPH2P55795 449 aaKnown RBP19.08■□□□□ 0.64
SMPD3-211ENST00000568373 SMTNL2Q2TAL5 461 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 GOLGA7BQ2TAP0 167 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 UBXN11Q5T124 520 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 CCDC25Q86WR0 208 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 NME8Q8N427 588 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 C7orf31Q8N865 590 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 TSPYL1Q9H0U9 437 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 ZWILCHQ9H900 591 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 BCCIPQ9P287 314 aaKnown RBP eCLIP19.08■□□□□ 0.64
SMPD3-211ENST00000568373 DNPEPQ9ULA0 475 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 EFR3BQ9Y2G0 817 aa19.08■□□□□ 0.64
SMPD3-211ENST00000568373 CENPFP49454 3210 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 E5RJQ4 531 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 EIF3HO15372 352 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMPD3-211ENST00000568373 CD4P01730 458 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 VPS41P49754 854 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 CRHR2Q13324 411 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 PPP1R26Q5T8A7 1209 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-211ENST00000568373 TRMT10CQ7L0Y3 403 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms