RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 DAAM1Q9Y4D1 1078 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 YIPF1Q9Y548 306 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 PCDHB5Q9Y5E4 795 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 INSL5Q9Y5Q6 135 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 FOXN3O00409 490 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-222ENST00000568034 CLDN5O00501 218 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 SOAT2O75908 522 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 CALCAP01258 141 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 PAEPP09466 180 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 HAPLN1P10915 354 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-222ENST00000568034 CYP2F1P24903 491 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 CACNA2D1P54289 1103 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 C4orf50Q6ZRC1 276 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 FAM35AQ86V20 835 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 C12orf76Q8N812 135 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-222ENST00000568034 NEK11Q8NG66 645 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 ZNF707Q96C28 371 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-222ENST00000568034 PCMTD1Q96MG8 357 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-222ENST00000568034 STK33Q9BYT3 514 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 UBE2ZQ9H832 354 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-222ENST00000568034 CEP72Q9P209 647 aa19.13■□□□□ 0.65
COMMD4-222ENST00000568034 F8VZ95 297 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 KRT5P13647 590 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 ATF6P18850 670 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 HOXA9P31269 272 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 ELF1P32519 619 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 MAGEA11P43364 429 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 GPR15P49685 360 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 CYP27A1Q02318 531 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 RAPGEF1Q13905 1077 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 UVSSAQ2YD98 709 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 PPP1R26Q5T8A7 1209 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-222ENST00000568034 LIN9Q5TKA1 542 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 ARHGAP17Q68EM7 881 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 CCDC149Q6ZUS6 474 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 RTL10Q7L3V2 364 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 SPATA2LQ8IUW3 424 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-222ENST00000568034 FAM71AQ8IYT1 594 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 CMASQ8NFW8 434 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-222ENST00000568034 SLC2A14Q8TDB8 520 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 TFAP2BQ92481 460 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 HNRNPABQ99729 332 aaKnown RBP19.12■□□□□ 0.65
COMMD4-222ENST00000568034 S1PR5Q9H228 398 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 SFXN1Q9H9B4 322 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 ACP6Q9NPH0 428 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 NLRC4Q9NPP4 1024 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 PRDM6Q9NQX0 595 aa19.12■□□□□ 0.65
COMMD4-222ENST00000568034 PRRG1O14668 218 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 CBFA2T2O43439 604 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 POU2F2P09086 479 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 SRGAP2BP0DMP2 458 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 BDNFP23560 247 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 TWF1Q12792 350 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 SKIV2LQ15477 1246 aaKnown RBP19.11■□□□□ 0.65
COMMD4-222ENST00000568034 MGAT5BQ3V5L5 792 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 BAP1Q92560 729 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 CYFIP2Q96F07 1278 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 HEXIM2Q96MH2 286 aaKnown RBP19.11■□□□□ 0.65
COMMD4-222ENST00000568034 SEPT5Q99719 369 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-222ENST00000568034 ZDHHC7Q9NXF8 308 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 DPP7Q9UHL4 492 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 COL6A3P12111 3177 aa19.11■□□□□ 0.65
COMMD4-222ENST00000568034 ITIH6Q6UXX5 1313 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 H3BQ06 376 aaPredicted RBP19.1■□□□□ 0.65
COMMD4-222ENST00000568034 O00370 1275 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 CYP26A1O43174 497 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 HNRNPA1P09651 372 aaKnown RBP eCLIP19.1■□□□□ 0.65
COMMD4-222ENST00000568034 VDRP11473 427 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 HOXB8P17481 243 aaPredicted RBP19.1■□□□□ 0.65
COMMD4-222ENST00000568034 BRD2P25440 801 aaKnown RBP19.1■□□□□ 0.65
COMMD4-222ENST00000568034 CLCN1P35523 988 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 FIGNQ5HY92 759 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 PPM1LQ5SGD2 360 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 VSTM1Q6UX27 236 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 EP400NLQ6ZTU2 488 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 ZMIZ2Q8NF64 920 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 PRKD2Q9BZL6 878 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 CDH22Q9UJ99 828 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 C2orf16Q68DN1 1984 aa19.1■□□□□ 0.65
COMMD4-222ENST00000568034 CCDC195A0A1B0GUA6 201 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 CCL16O15467 120 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 BEST1O76090 585 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 CD19P15391 556 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 KCNA5P22460 613 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 ADORA2BP29275 332 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 TUFMP49411 452 aaKnown RBP19.09■□□□□ 0.65
COMMD4-222ENST00000568034 DDR2Q16832 855 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 SGO2Q562F6 1265 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 RARS2Q5T160 578 aaKnown RBP19.09■□□□□ 0.65
COMMD4-222ENST00000568034 SDHAF4Q5VUM1 108 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 TMC5Q6UXY8 1006 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 SMRP1Q8NCR6 262 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 HLA-CQ95604 372 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 SMARCD1Q96GM5 515 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 SMOQ99835 787 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 APOL5Q9BWW9 433 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 CSNK1G1Q9HCP0 422 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 KRT82Q9NSB4 513 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 KIAA1257Q9ULG3 409 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 PRUNE2Q8WUY3 3088 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms