RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SMOC2Q9H3U7 446 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 ABCB6Q9NP58 842 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 FBXW11Q9UKB1 542 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 HCFC2Q9Y5Z7 792 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 FAM186AA6NE01 2351 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 A8MXQ7 604 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 CBFA2T2O43439 604 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 PAPLNO95428 1278 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 POU2F2P09086 479 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 HOXA9P31269 272 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 FANCCQ00597 558 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 C4orf50Q6ZRC1 276 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 OSTM1Q86WC4 334 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 TMEM105Q8N8V8 129 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 OR10T2Q8NGX3 314 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 IQCDQ96DY2 449 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 CEP295NLQ96MC4 621 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 CRACR2AQ9BSW2 395 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 RHOBTB2Q9BYZ6 727 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 KIAA1257Q9ULG3 409 aa17.8■□□□□ 0.44
CLN6-208ENST00000567060 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 TGM5O43548 720 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 LRRN2O75325 713 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 WEE2P0C1S8 567 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 RPL17P18621 184 aaKnown RBP17.79■□□□□ 0.44
CLN6-208ENST00000567060 SLC9A1P19634 815 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 ELF1P32519 619 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 UBASH3AP57075 661 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 KCNMA1Q12791 1236 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 CFAP221Q4G0U5 840 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 LIN9Q5TKA1 542 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 PHLDB3Q6NSJ2 640 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 RSPO2Q6UXX9 243 aaPredicted RBP17.79■□□□□ 0.44
CLN6-208ENST00000567060 SCARA5Q6ZMJ2 495 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 FMNL3Q8IVF7 1028 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 TCEAL8Q8IYN2 117 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 UBR7Q8N806 425 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 MYCBPAPQ8TBZ2 947 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 PKMYT1Q99640 499 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 SDCBP2Q9H190 292 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 POMKQ9H5K3 350 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 ZDHHC7Q9NXF8 308 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 CNTN6Q9UQ52 1028 aa17.79■□□□□ 0.44
CLN6-208ENST00000567060 ATP8B3O60423 1300 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 C2CD4DB7Z1M9 353 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 PAEPP09466 180 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 HNRNPA1P09651 372 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLN6-208ENST00000567060 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
CLN6-208ENST00000567060 TUFMP49411 452 aaKnown RBP17.78■□□□□ 0.44
CLN6-208ENST00000567060 NDST1P52848 882 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 CDH8P55286 799 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 FOXK2Q01167 660 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 LRMPQ12912 555 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 PLD1Q13393 1074 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 NR1I3Q14994 352 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 KLHDC7AQ5VTJ3 777 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 UBALD2Q8IYN6 164 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 B3GALNT2Q8NCR0 500 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 CMASQ8NFW8 434 aaPredicted RBP17.78■□□□□ 0.44
CLN6-208ENST00000567060 UBE2TQ9NPD8 197 aaPredicted RBP17.78■□□□□ 0.44
CLN6-208ENST00000567060 SORCS3Q9UPU3 1222 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 SIK3Q9Y2K2 1263 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 PCDHB5Q9Y5E4 795 aa17.78■□□□□ 0.44
CLN6-208ENST00000567060 DNAH14Q0VDD8 3507 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 MTMR11A4FU01 709 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 PRR23AA6NEV1 266 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 ADAM12O43184 909 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 UCHL3P15374 230 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 LMO2P25791 158 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 NBL1P41271 181 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 MAGEA11P43364 429 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 RAP1GAPP47736 663 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 SLC39A12Q504Y0 691 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 SARM1Q6SZW1 724 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 VSTM1Q6UX27 236 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 PALB2Q86YC2 1186 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 RNF214Q8ND24 703 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 TMEM176AQ96HP8 235 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 ADAM7Q9H2U9 754 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 SIX2Q9NPC8 291 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 NR2E1Q9Y466 385 aa17.77■□□□□ 0.44
CLN6-208ENST00000567060 PDGFRBP09619 1106 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 CD58P19256 250 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 ACO1P21399 889 aaKnown RBP17.76■□□□□ 0.43
CLN6-208ENST00000567060 ARPP19P56211 112 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 ADCY1Q08828 1119 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 SYCP1Q15431 976 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 STILQ15468 1287 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 DPY19L2P1Q6NXN4 242 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 SPATA2LQ8IUW3 424 aaPredicted RBP17.76■□□□□ 0.43
CLN6-208ENST00000567060 GLYCTKQ8IVS8 523 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 ARHGEF19Q8IW93 802 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 NEK11Q8NG66 645 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 WHAMMQ8TF30 809 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 SHC3Q92529 594 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 ARID3AQ99856 593 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 NUP58Q9BVL2 599 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 LSM14BQ9BX40 385 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms