RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 SNX25Q9H3E2 840 aa10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 EXOC1Q9NV70 894 aa10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 EHD2Q9NZN4 543 aa10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 MAGED2Q9UNF1 606 aaPredicted RBP10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 ZDHHC9Q9Y397 364 aa10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 PIAS3Q9Y6X2 628 aa10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 USP34Q70CQ2 3546 aa10.86□□□□□ -0.67
HMGN2P40-201ENST00000566875 PDXKO00764 312 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 ACTN4O43707 911 aaKnown RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 KLRC4O43908 158 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 TACC1O75410 805 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 PFKFB1P16118 471 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 WARSP23381 471 aaKnown RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 CCNE1P24864 410 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 LMO2P25791 158 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 MAGEA11P43364 429 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 AMPD2Q01433 879 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 CSTF1Q05048 431 aaKnown RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 PPP2R5DQ14738 602 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 KMT5BQ4FZB7 885 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 STXBP5Q5T5C0 1151 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 RALGPS2Q86X27 583 aaPredicted RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 SCN4BQ8IWT1 228 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 GRAMD1CQ8IYS0 662 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 FSIP1Q8NA03 581 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 OR6B3Q8NGW1 331 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 ZNF516Q92618 1163 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 SYAP1Q96A49 352 aaPredicted RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 RSPRY1Q96DX4 576 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 LRRC3BQ96PB8 259 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 PKMYT1Q99640 499 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 CGRRF1Q99675 332 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 IER2Q9BTL4 223 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 FAM126AQ9BYI3 521 aaPredicted RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 GKN1Q9NS71 199 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 TDP1Q9NUW8 608 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 DMAC2Q9NW81 257 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 HPSEQ9Y251 543 aa10.85□□□□□ -0.67
HMGN2P40-201ENST00000566875 FAM237AA0A1B0GTK4 181 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 SHISA7A6NL88 538 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 SLC38A8A6NNN8 435 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 ARNTLO00327 626 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 IKBKBO14920 756 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 ATP2C2O75185 946 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 NOL4O94818 638 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 PTPN1P18031 435 aaKnown RBP10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 GRIK1P39086 918 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 NRLP54845 237 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 TNNC1P63316 161 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 CLDN10P78369 228 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 CYP4F8P98187 520 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 BECN1Q14457 450 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 DGKKQ5KSL6 1271 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 TXNDC8Q6A555 127 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 CC2D1AQ6P1N0 951 aaPredicted RBP10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 TMEM150AQ86TG1 271 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 MAML2Q8IZL2 1156 aaPredicted RBP10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 ADSSL1Q8N142 457 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 MYCBPAPQ8TBZ2 947 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 PARD3BQ8TEW8 1205 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 KBTBD7Q8WVZ9 684 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 TRMT2BQ96GJ1 504 aaKnown RBP10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 FAM84AQ96KN4 292 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 SPATA17Q96L03 361 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 SYT15Q9BQS2 421 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 R4GN57 208 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 PDCD11Q14690 1871 aaKnown RBP10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 KMT2EQ8IZD2 1858 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 VPS13AQ96RL7 3174 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 PTPRJQ12913 1337 aa10.84□□□□□ -0.67
HMGN2P40-201ENST00000566875 CALUO43852 315 aaPredicted RBP10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 KINO60870 393 aaKnown RBP10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 C4BPAP04003 597 aaKnown RBP10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 RPN1P04843 607 aaKnown RBP10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 CHRNB1P11230 501 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 HDCP19113 662 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 BDNFP23560 247 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 CXCL12P48061 93 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 PPP3CCP48454 512 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 GPR15P49685 360 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 NDUFA8P51970 172 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 MYL6P60660 151 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 CYP27A1Q02318 531 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 MTAPQ13126 283 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 LRRC32Q14392 662 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 ITPRIPL2Q3MIP1 535 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 SDHAF4Q5VUM1 108 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 SYNPOQ8N3V7 929 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 EXOC4Q96A65 974 aa10.83□□□□□ -0.68
HMGN2P40-201ENST00000566875 FAM83CQ9BQN1 747 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms