RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 PAQR9Q6ZVX9 377 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 GET4Q7L5D6 327 aaPredicted RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 ENOX1Q8TC92 643 aaKnown RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 NXPE3Q969Y0 559 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 SPATA17Q96L03 361 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 CNOT6LQ96LI5 555 aaKnown RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 MYRFLQ96LU7 910 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 LPIN3Q9BQK8 851 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 B3GNT5Q9BYG0 378 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 IL21Q9HBE4 155 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 ASAH2Q9NR71 780 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 GDE1Q9NZC3 331 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 IGSF9Q9P2J2 1179 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 HMGXB4Q9UGU5 601 aa18.44■□□□□ 0.54
USB1-209ENST00000564387 MRPS23Q9Y3D9 190 aaKnown RBP18.44■□□□□ 0.54
USB1-209ENST00000564387 DCXO43602 365 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 FGF19O95750 216 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 AFPP02771 609 aaKnown RBP18.43■□□□□ 0.54
USB1-209ENST00000564387 GBP2P32456 591 aaPredicted RBP18.43■□□□□ 0.54
USB1-209ENST00000564387 CDR1P51861 262 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 PTPN21Q16825 1174 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 KLHL40Q2TBA0 621 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 MDH1BQ5I0G3 518 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 GAREM2Q75VX8 874 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 PDZD4Q76G19 769 aaPredicted RBP18.43■□□□□ 0.54
USB1-209ENST00000564387 UBR7Q8N806 425 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 TCEAL4Q96EI5 215 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 TRMT2BQ96GJ1 504 aaKnown RBP18.43■□□□□ 0.54
USB1-209ENST00000564387 ZNF334Q9HCZ1 680 aaPredicted RBP18.43■□□□□ 0.54
USB1-209ENST00000564387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.43■□□□□ 0.543e-9■■■■■ 81.5
USB1-209ENST00000564387 MUTYHQ9UIF7 546 aa18.43■□□□□ 0.54
USB1-209ENST00000564387 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 NOL4O94818 638 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 CSH1P0DML2 217 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 CSH2P0DML3 217 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 ALADP13716 330 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 CEBPBP17676 345 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 BDNFP23560 247 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 GPR15P49685 360 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 HTR4Q13639 388 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 VEPH1Q14D04 833 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 DDR2Q16832 855 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 FUKQ8N0W3 1084 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 EHBP1Q8NDI1 1231 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 SHKBP1Q8TBC3 707 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 C8orf48Q96LL4 319 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 TWNKQ96RR1 684 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 ELOVL4Q9GZR5 314 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 KCNK12Q9HB15 430 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 TMEM30AQ9NV96 361 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 ANO10Q9NW15 660 aa18.42■□□□□ 0.54
USB1-209ENST00000564387 GREB1Q4ZG55 1949 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 CYP27A1Q02318 531 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 CETN1Q12798 172 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 CUL2Q13617 745 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 TMEM150AQ86TG1 271 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 ACOT1Q86TX2 421 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 FAM114A1Q8IWE2 563 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 GIPC2Q8TF65 315 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 ARID3AQ99856 593 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 NT5C1AQ9BXI3 368 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 ZNF518BQ9C0D4 1074 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 GPR88Q9GZN0 384 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 CSNK1G1Q9HCP0 422 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 CISHQ9NSE2 258 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 SORCS3Q9UPU3 1222 aa18.41■□□□□ 0.54
USB1-209ENST00000564387 GTPBP10A4D1E9 387 aaKnown RBP18.4■□□□□ 0.54
USB1-209ENST00000564387 TRIM66O15016 1216 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 F11P03951 625 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 MYL4P12829 197 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 PTMSP20962 102 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 TBXAS1P24557 533 aaPredicted RBP18.4■□□□□ 0.54
USB1-209ENST00000564387 WEE1P30291 646 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 CACNA2D1P54289 1103 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 STX1AQ16623 288 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 GPR152Q8TDT2 470 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 EDAQ92838 391 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 HNRNPABQ99729 332 aaKnown RBP18.4■□□□□ 0.54
USB1-209ENST00000564387 EPHX3Q9H6B9 360 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 TRPV4Q9HBA0 871 aa18.4■□□□□ 0.54
USB1-209ENST00000564387 SAMSN1Q9NSI8 373 aaKnown RBP18.4■□□□□ 0.54
USB1-209ENST00000564387 SLC38A8A6NNN8 435 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 SOBPA7XYQ1 873 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 CLDN5O00501 218 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 CLSTN1O94985 981 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 ASGR2P07307 311 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
USB1-209ENST00000564387 RAD23BP54727 409 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 ZXDAP98168 799 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 GCNT1Q02742 428 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 TDGQ13569 410 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 MAN2A1Q16706 1144 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
USB1-209ENST00000564387 MIIPQ5JXC2 388 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 SDHAF4Q5VUM1 108 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 CDKAL1Q5VV42 579 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 SMYD5Q6GMV2 418 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 C11orf57Q6ZUT1 292 aaPredicted RBP18.39■□□□□ 0.53
USB1-209ENST00000564387 FAM35AQ86V20 835 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms