RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 B3GNT5Q9BYG0 378 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 OSGEPQ9NPF4 335 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 ADAM22Q9P0K1 906 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 MYO1AQ9UBC5 1043 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 CHORDC1Q9UHD1 332 aaPredicted RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 GTF3C4Q9UKN8 822 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 CEP83Q9Y592 693 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 CAPN6Q9Y6Q1 641 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 TULP2O00295 520 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 CLDN5O00501 218 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 FANCGO15287 622 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 KIF5CO60282 957 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 OAZ2O95190 189 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 CYP1A2P05177 515 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 MMP8P22894 467 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 PCSK1P29120 753 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 CDR1P51861 262 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 GNG11P61952 73 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 ETF1P62495 437 aaKnown RBP10.76□□□□□ -0.69
SMG1-208ENST00000563448 PTPN20Q4JDL3 420 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 ZNF569Q5MCW4 686 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
SMG1-208ENST00000563448 PPP1R2P3Q6NXS1 205 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 FAM171BQ6P995 826 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 SYT10Q6XYQ8 523 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 LRRTM3Q86VH5 581 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 CEP57Q86XR8 500 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 RNF168Q8IYW5 571 aaPredicted RBP10.76□□□□□ -0.69
SMG1-208ENST00000563448 SLC39A11Q8N1S5 342 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 SLC35F6Q8N357 371 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 ANKRD52Q8NB46 1076 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 MYCBPAPQ8TBZ2 947 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 RFFLQ8WZ73 363 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 PCED1BQ96HM7 432 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 VCPIP1Q96JH7 1222 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 ZNF558Q96NG5 402 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 WDR24Q96S15 920 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 SLC9A7Q96T83 725 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 TMLHEQ9NVH6 421 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 HESX1Q9UBX0 185 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 TJP2Q9UDY2 1190 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 CNOT8Q9UFF9 292 aaKnown RBP10.76□□□□□ -0.69
SMG1-208ENST00000563448 COG5Q9UP83 839 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 SF3B1O75533 1304 aaKnown RBP eCLIP10.76□□□□□ -0.696e-10■■■■■ 187.2
SMG1-208ENST00000563448 ATG2AQ2TAZ0 1938 aa10.76□□□□□ -0.69
SMG1-208ENST00000563448 MTCL1Q9Y4B5 1905 aaKnown RBP10.76□□□□□ -0.69
SMG1-208ENST00000563448 LINC00271P0C7V0 271 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 LAG3P18627 525 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 RRM1P23921 792 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 PDE4CQ08493 712 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 ELAVL2Q12926 359 aaKnown RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 PDCLQ13371 301 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 TCEAL1Q15170 157 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 RTP2Q5QGT7 225 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 RASIP1Q5U651 963 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 ERICH1Q86X53 443 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 PHOSPHO2Q8TCD6 241 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 SLC35F5Q8WV83 523 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 TRIM11Q96F44 468 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 CPXM1Q96SM3 734 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 SLC4A7Q9Y6M7 1214 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 PLXNA3P51805 1871 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 KIF2AO00139 706 aaPredicted RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 CAPN15O75808 1086 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 BEST1O76090 585 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 ERBB2P04626 1255 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 CALB1P05937 261 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 OR4Q2P0C623 313 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 SETSIPP0DME0 302 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 MYBL1P10243 752 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 NOP2P46087 812 aaKnown RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 BCAT1P54687 386 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 NAP1L1P55209 391 aaKnown RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 BST2Q10589 180 aaKnown RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 CYP4A22Q5TCH4 519 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 RHOT2Q8IXI1 618 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 MYLPFQ96A32 169 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 NOX5Q96PH1 765 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 ZBED2Q9BTP6 218 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 MED10Q9BTT4 135 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 NUP85Q9BW27 656 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 DUSP16Q9BY84 665 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 AVENQ9NQS1 362 aaPredicted RBP10.75□□□□□ -0.69
SMG1-208ENST00000563448 DNAI1Q9UI46 699 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
SMG1-208ENST00000563448 TCRBV5S1A1TA0A578 114 aa10.74□□□□□ -0.69
SMG1-208ENST00000563448 TBC1D4O60343 1298 aa10.74□□□□□ -0.69
SMG1-208ENST00000563448 GABBR2O75899 941 aa10.74□□□□□ -0.69
SMG1-208ENST00000563448 TUBB4AP04350 444 aa10.74□□□□□ -0.69
SMG1-208ENST00000563448 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
SMG1-208ENST00000563448 GABRB2P47870 512 aa10.74□□□□□ -0.69
SMG1-208ENST00000563448 RGS7P49802 495 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms