RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF461Q8TAF7 563 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 RILPL2Q969X0 211 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 CCDC51Q96ER9 411 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 CPB2Q96IY4 423 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 KIF2CQ99661 725 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 JPH2Q9BR39 696 aaPredicted RBP5.87□□□□□ -1.47
HERC1-213ENST00000561359 CSRNP2Q9H175 543 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 RBSNQ9H1K0 784 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 RIC8AQ9NPQ8 531 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TMEM74BQ9NUR3 256 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 STIM2Q9P246 746 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 INSL5Q9Y5Q6 135 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 ATXN2Q99700 1313 aaKnown RBP5.87□□□□□ -1.47
HERC1-213ENST00000561359 COL4A2P08572 1712 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 WDR81Q562E7 1941 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 NUP205Q92621 2012 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 KNTC1P50748 2209 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 DOPEY2Q9Y3R5 2298 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 PI4KAP42356 2102 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 MYH9P35579 1960 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 ZMYM2Q9UBW7 1377 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 IGLV3-22A0A075B6J6 115 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 A0A0A0MRY4 1105 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TRDMT1O14717 391 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 RRP8O43159 456 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 SLC28A2O43868 658 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 ADAM23O75077 832 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 MAFO75444 373 aaPredicted RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 GHRHP01286 108 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 PRKCBP05771 671 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 CALM1P0DP23 149 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 CALM2P0DP24 149 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 CALM3P0DP25 149 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 ATF2P15336 505 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TKTP29401 623 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 AXLP30530 894 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 DPP6P42658 865 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 PTGER3P43115 390 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 SETQ01105 290 aaPredicted RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 ROR1Q01973 937 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TWF1Q12792 350 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 AP3B2Q13367 1082 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 DOC2BQ14184 412 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 DUOXA1Q1HG43 343 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 FBXO43Q4G163 708 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 PRR16Q569H4 304 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 XKR3Q5GH77 459 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 LYSMD4Q5XG99 296 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 ANO7Q6IWH7 933 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 CWC27Q6UX04 472 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 ANKS3Q6ZW76 656 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TMPRSS7Q7RTY8 843 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 GPR155Q7Z3F1 870 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 RALYLQ86SE5 291 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 SLCO6A1Q86UG4 719 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TICAM2Q86XR7 235 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 TCEAL8Q8IYN2 117 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 ZNF654Q8IZM8 581 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 RNF149Q8NC42 400 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 CEP76Q8TAP6 659 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 SHKBP1Q8TBC3 707 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 SPATA18Q8TC71 538 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 PRPF31Q8WWY3 499 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 PSPC1Q8WXF1 523 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 RLN3Q8WXF3 142 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 NSUN5Q96P11 429 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 LRRC3BQ96PB8 259 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 CEP89Q96ST8 783 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 MAP3K14Q99558 947 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 DSCC1Q9BVC3 393 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 SMG9Q9H0W8 520 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 THG1LQ9NWX6 298 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 FRRS1LQ9P0K9 344 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 FNDC3AQ9Y2H6 1198 aaKnown RBP5.86□□□□□ -1.47
HERC1-213ENST00000561359 BACE2Q9Y5Z0 518 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 KCNMB2Q9Y691 235 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 THADAQ6YHU6 1953 aa5.86□□□□□ -1.47
HERC1-213ENST00000561359 SALL3Q9BXA9 1300 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 FAM149AA5PLN7 773 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 B8ZZF3 427 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 INO80B-WBP1J3KQ70 363 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 TSPAN1O60635 241 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 GAS7O60861 476 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 MMP20O60882 483 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 DDAH1O94760 285 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 B3GAT3O94766 335 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 ABLIM3O94929 683 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 SEC24AO95486 1093 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 NPTXRO95502 500 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 THP07101 528 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 SYPP08247 313 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 SERPINF2P08697 491 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 SDSP20132 328 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 DRD1P21728 446 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 ITPKAP23677 461 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 U2AF2P26368 475 aaKnown RBP eCLIP5.85□□□□□ -1.471e-8■■■■■ 26.9
HERC1-213ENST00000561359 SFNP31947 248 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 HOXD12P35452 270 aa5.85□□□□□ -1.47
HERC1-213ENST00000561359 EIF2S3P41091 472 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms