RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ACO1P21399 889 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 RAD23BP54727 409 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 EPHA5P54756 1037 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 PAQR9Q6ZVX9 377 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 ACOT1Q86TX2 421 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 SPATA2LQ8IUW3 424 aaPredicted RBP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 ARHGEF19Q8IW93 802 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 PPM1KQ8N3J5 372 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 TTC9BQ8N6N2 239 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 SLC4A11Q8NBS3 891 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 SMG7Q92540 1137 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 TMEM176AQ96HP8 235 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 KREMEN1Q96MU8 473 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 ERGIC2Q96RQ1 377 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 TWNKQ96RR1 684 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 HNRNPABQ99729 332 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 ARID3AQ99856 593 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 CRACR2AQ9BSW2 395 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 B3GNT5Q9BYG0 378 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 ELOVL4Q9GZR5 314 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 VPS16Q9H269 839 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 DPEP3Q9H4B8 488 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 WDR6Q9NNW5 1121 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 PLCB1Q9NQ66 1216 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 TAB2Q9NYJ8 693 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 CEP72Q9P209 647 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 APEX2Q9UBZ4 518 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 PRKAG3Q9UGI9 489 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 KIAA1257Q9ULG3 409 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 DAAM1Q9Y4D1 1078 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 YIPF1Q9Y548 306 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 MUC3AQ02505 3323 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 PAEPP09466 180 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 ATF6P18850 670 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 RFX1P22670 979 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 CYP2F1P24903 491 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 ALDH1A3P47895 512 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 KCNQ1P51787 676 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 ZNF132P52740 706 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 EPHB3P54753 998 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 MFAP3P55082 362 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 PSMC1P62191 440 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 RPL10AP62906 217 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 TWF1Q12792 350 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 LRMPQ12912 555 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 CCDC142Q17RM4 750 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 MDH1BQ5I0G3 518 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 ARHGAP17Q68EM7 881 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 RRAGAQ7L523 313 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 LUZP1Q86V48 1076 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 FUKQ8N0W3 1084 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 LEMD2Q8NC56 503 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 FEZF2Q8TBJ5 459 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 KAT5Q92993 513 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 PSMG2Q969U7 264 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 MYLPFQ96A32 169 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 SPATA17Q96L03 361 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 ZNF512Q96ME7 567 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 LRRC3Q9BY71 257 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 TSPY26PQ9H489 355 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 CSNK1G1Q9HCP0 422 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 UBE2TQ9NPD8 197 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 ABI2Q9NYB9 513 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 HMGXB4Q9UGU5 601 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 SIK3Q9Y2K2 1263 aa10.24□□□□□ -0.77
RABGGTA-221ENST00000561055 A0A1B0GTH6 734 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 CCL16O15467 120 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 CLSTN1O94985 981 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 IL9P15248 144 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 HMGA1P17096 107 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 CD58P19256 250 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 BDNFP23560 247 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 TPM4P67936 248 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 CYP27A1Q02318 531 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 CLUL1Q15846 466 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 MGAT5BQ3V5L5 792 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 FKBP15Q5T1M5 1219 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 KLHDC7AQ5VTJ3 777 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 GRASPQ7Z6J2 395 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 DNAJB7Q7Z6W7 309 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 ITIH5Q86UX2 942 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 ELMOD1Q8N336 334 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 C12orf29Q8N999 325 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 SHC3Q92529 594 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 CYFIP2Q96F07 1278 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 TRMT2BQ96GJ1 504 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 MYRFLQ96LU7 910 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 LPIN3Q9BQK8 851 aa10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 PHF7Q9BWX1 381 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 NAA15Q9BXJ9 866 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-221ENST00000561055 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms