RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ANKS3Q6ZW76 656 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 RALYLQ86SE5 291 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 RBM12BQ8IXT5 1001 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 IFNL3Q8IZI9 196 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 MIGA1Q8NAN2 632 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 PRPF38AQ8NAV1 312 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 OR6J1Q8NGC5 347 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 SH3RF2Q8TEC5 729 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 MAP4K1Q92918 833 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 P2RX5Q93086 422 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 NEUROD6Q96NK8 337 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 NEK1Q96PY6 1258 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 POMKQ9H5K3 350 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 GPR108Q9NPR9 543 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 PIH1D3Q9NQM4 214 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 HDAC6Q9UBN7 1215 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 ZFP69BQ9UJL9 534 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 NUB1Q9Y5A7 615 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 NAV2Q8IVL1 2488 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 FREM2Q5SZK8 3169 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 EMSYQ7Z589 1322 aa4.46□□□□□ -1.69
HERC1-211ENST00000560983 HELZ2Q9BYK8 2649 aaKnown RBP4.46□□□□□ -1.69
HERC1-211ENST00000560983 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.46□□□□□ -1.7
HERC1-211ENST00000560983 TCRBV5S4A2TA0A5A2 114 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 RSPH10B2B2RC85 870 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 PRODHO43272 600 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 ZNF623O75123 536 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 FSHBP01225 129 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 RSPH10BP0C881 870 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 CYP2D6P10635 497 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 COL6A2P12110 1019 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 TECP42680 631 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 OAZ1P54368 228 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 PFKPQ01813 784 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 EXOSC9Q06265 439 aaKnown RBP4.46□□□□□ -1.7
HERC1-211ENST00000560983 SPIRE1Q08AE8 756 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 TDGQ13569 410 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 WDR43Q15061 677 aaKnown RBP eCLIP4.46□□□□□ -1.7
HERC1-211ENST00000560983 ZNF528Q3MIS6 628 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 PHF19Q5T6S3 580 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 NSMFQ6X4W1 530 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 KCTD1Q719H9 257 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 ZBTB44Q8NCP5 570 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 NELL1Q92832 810 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 DYNLL2Q96FJ2 89 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 BBC3Q96PG8 261 aaPredicted RBP4.46□□□□□ -1.7
HERC1-211ENST00000560983 RIOK1Q9BRS2 568 aaKnown RBP4.46□□□□□ -1.7
HERC1-211ENST00000560983 EPC1Q9H2F5 836 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 SH2D4AQ9H788 454 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 ST7Q9NRC1 585 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 HOMER2Q9NSB8 354 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 CYP39A1Q9NYL5 469 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 WNT16Q9UBV4 365 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 DSEQ9UL01 958 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 USP18Q9UMW8 372 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 MSRB2Q9Y3D2 182 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 MRPL42Q9Y6G3 142 aaKnown RBP4.46□□□□□ -1.7
HERC1-211ENST00000560983 CEP295Q9C0D2 2601 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 DSPP15924 2871 aaKnown RBP4.46□□□□□ -1.7
HERC1-211ENST00000560983 ADGRA3Q8IWK6 1321 aa4.46□□□□□ -1.7
HERC1-211ENST00000560983 TRAV20A0A0B4J274 112 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 F5H6K3 240 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 HAS3O00219 553 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 ENPP3O14638 875 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 MUSKO15146 869 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 NARSO43776 548 aaKnown RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 IGSF3O75054 1194 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 NDUFB10O96000 172 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 SOD2P04179 222 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 MMP3P08254 477 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 WEE2P0C1S8 567 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 UQCRFS1P1P0C7P4 283 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 GNAT1P11488 350 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 HOXB8P17481 243 aaPredicted RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 THPOP40225 353 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 KLRC3Q07444 240 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 RAB33AQ14088 237 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 BTG3Q14201 252 aaPredicted RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 RALBP1Q15311 655 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 BRDTQ58F21 947 aaPredicted RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 SPECC1Q5M775 1068 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 YOD1Q5VVQ6 348 aaPredicted RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 TCTN3Q6NUS6 607 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 ZNF585AQ6P3V2 769 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 LRRC47Q8N1G4 583 aaKnown RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 STPG3Q8N7X2 389 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 AFG1LQ8WV93 481 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 SEPT8Q92599 483 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 NECTIN4Q96NY8 510 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 CDCA3Q99618 268 aaPredicted RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 HNRNPABQ99729 332 aaKnown RBP4.45□□□□□ -1.7
HERC1-211ENST00000560983 ACAD9Q9H845 621 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 IPPKQ9H8X2 491 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 KANSL2Q9H9L4 492 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 MCM9Q9NXL9 1143 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 ARHGAP20Q9P2F6 1191 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 DUSP12Q9UNI6 340 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 ZDHHC9Q9Y397 364 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms