RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TIFAQ96CG3 184 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 MSLNLQ96KJ4 702 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 SLC46A1Q96NT5 459 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 MOGAT1Q96PD6 335 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 NELL2Q99435 816 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 AIFM2Q9BRQ8 373 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 SARGQ9BW04 601 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 AMBRA1Q9C0C7 1298 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 TESQ9UGI8 421 aaKnown RBP5.5□□□□□ -1.53
PSMA4-221ENST00000560842 DMTF1Q9Y222 760 aa5.5□□□□□ -1.53
PSMA4-221ENST00000560842 MPPED1O15442 326 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 TRIAP1O43715 76 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 VPS4BO75351 444 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 C1RP00736 705 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 PPP3CBP16298 524 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 ITGALP20701 1170 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 FOLR3P41439 243 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 HNRNPMP52272 730 aaKnown RBP eCLIP5.49□□□□□ -1.53
PSMA4-221ENST00000560842 ZNF134P52741 427 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 LOXL3P58215 753 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 FMO1Q01740 532 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 CNGA2Q16280 664 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 KIAA0753Q2KHM9 967 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 HSP90AB2PQ58FF8 381 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 LMBRD2Q68DH5 695 aaPredicted RBP5.49□□□□□ -1.53
PSMA4-221ENST00000560842 SFRP4Q6FHJ7 346 aaPredicted RBP5.49□□□□□ -1.53
PSMA4-221ENST00000560842 BOLLQ8N9W6 283 aaKnown RBP5.49□□□□□ -1.53
PSMA4-221ENST00000560842 SLC30A5Q8TAD4 765 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 CAVIN3Q969G5 261 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 PGBD1Q96JS3 809 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 ZNF518BQ9C0D4 1074 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 LRRC27Q9C0I9 530 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 BTBD1Q9H0C5 482 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 CASS4Q9NQ75 786 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 STK32BQ9NY57 414 aa5.49□□□□□ -1.53
PSMA4-221ENST00000560842 COL3A1P02461 1466 aaPredicted RBP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 TRIM43BA6NCK2 446 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 F5H697 171 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 XRCC6P12956 609 aaKnown RBP eCLIP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 TRIM27P14373 513 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 CHRM3P20309 590 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 PEX2P28328 305 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 CTGFP29279 349 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 PPIFP30405 207 aaKnown RBP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 GNALP38405 381 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 SUMO3P55854 103 aaPredicted RBP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 NXPH1P58417 271 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 ITIH3Q06033 890 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 SLC13A2Q13183 592 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 NBPF8Q3BBV2 869 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 PREPLQ4J6C6 727 aaPredicted RBP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 DNAJC5GQ8N7S2 189 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 PCSK9Q8NBP7 692 aaKnown RBP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 TRIM43Q96BQ3 446 aaPredicted RBP5.48□□□□□ -1.53
PSMA4-221ENST00000560842 PDLIM2Q96JY6 352 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 PCGF6Q9BYE7 350 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 XPNPEP3Q9NQH7 507 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 FOXJ2Q9P0K8 574 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 CPNE7Q9UBL6 633 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 TMX2Q9Y320 296 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
PSMA4-221ENST00000560842 TBC1D4O60343 1298 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 MGEA5O60502 916 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 CXCR5P32302 372 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 PLA2G5P39877 138 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 FOXF2Q12947 444 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 RAB32Q13637 225 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 RBM20Q5T481 1227 aaKnown RBP5.47□□□□□ -1.53
PSMA4-221ENST00000560842 CCDC181Q5TID7 509 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 TMEM108Q6UXF1 575 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 MYCBPAPQ8TBZ2 947 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 FBXO41Q8TF61 875 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 FAM136AQ96C01 138 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 PTDSS2Q9BVG9 487 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 NUP62CLQ9H1M0 184 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 COL20A1Q9P218 1284 aa5.47□□□□□ -1.53
PSMA4-221ENST00000560842 AFF4Q9UHB7 1163 aaKnown RBP5.47□□□□□ -1.53
PSMA4-221ENST00000560842 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
PSMA4-221ENST00000560842 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.54
PSMA4-221ENST00000560842 YY2O15391 372 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 PEX1O43933 1283 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 PHKG2P15735 406 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 CD6P30203 668 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 LRPAP1P30533 357 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 PXNP49023 591 aaPredicted RBP5.46□□□□□ -1.54
PSMA4-221ENST00000560842 ZNF169Q14929 603 aaPredicted RBP5.46□□□□□ -1.54
PSMA4-221ENST00000560842 VPS53Q5VIR6 699 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 DTX2Q86UW9 622 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 SESTD1Q86VW0 696 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 SLC44A3Q8N4M1 653 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 SLC15A4Q8N697 577 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 SCARB1Q8WTV0 552 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 PHKBQ93100 1093 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 KIAA1586Q9HCI6 787 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 A1CFQ9NQ94 594 aaKnown RBP5.46□□□□□ -1.54
PSMA4-221ENST00000560842 KLC4Q9NSK0 619 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 SHOC2Q9UQ13 582 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 SSX2IPQ9Y2D8 614 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 ADGRA2Q96PE1 1338 aa5.46□□□□□ -1.54
PSMA4-221ENST00000560842 VWC2LB2RUY7 222 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms