RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 PTPN1P18031 435 aaKnown RBP15.28■□□□□ 0.04
ZEB1-218ENST00000560196 LMO2P25791 158 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 SCNN1AP37088 669 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 DNA2P51530 1060 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 BST2Q10589 180 aaKnown RBP15.28■□□□□ 0.04
ZEB1-218ENST00000560196 PIGHQ14442 188 aaPredicted RBP15.28■□□□□ 0.04
ZEB1-218ENST00000560196 GLE1Q53GS7 698 aaKnown RBP15.28■□□□□ 0.04
ZEB1-218ENST00000560196 CLLU1OSQ5K130 101 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 LRRC38Q5VT99 294 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 DCAF12L1Q5VU92 463 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 PHLDB2Q86SQ0 1253 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 TMEM110Q86TL2 294 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 B3GALNT2Q8NCR0 500 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 C3orf58Q8NDZ4 430 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 DBF4BQ8NFT6 615 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 UBA3Q8TBC4 463 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 RUBCNQ92622 972 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 HIPK3Q9H422 1215 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 INPP5FQ9Y2H2 1132 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 TARSL2A2RTX5 802 aaKnown RBP15.27■□□□□ 0.04
ZEB1-218ENST00000560196 CCDC188H7C350 402 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 HOXA2O43364 376 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 PSTPIP1O43586 416 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 ODC1P11926 461 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 KRT3P12035 628 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 TYMPP19971 482 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 PCSK1P29120 753 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 ACADSBP45954 432 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 GJA8P48165 433 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 RWDD2BP57060 319 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 RPL7AP62424 266 aaKnown RBP15.27■□□□□ 0.04
ZEB1-218ENST00000560196 TLE2Q04725 743 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 ACAP1Q15027 740 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 PTPROQ16827 1216 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 TIGD5Q53EQ6 642 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 CYP4A22Q5TCH4 519 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 CCDC70Q6NSX1 233 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 ZDHHC17Q8IUH5 632 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 KRT35Q92764 455 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 HSFY1Q96LI6 401 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 RNPC3Q96LT9 517 aaKnown RBP15.27■□□□□ 0.04
ZEB1-218ENST00000560196 MCEEQ96PE7 176 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 PLVAPQ9BX97 442 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 SYNCQ9H7C4 482 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 ANKZF1Q9H8Y5 726 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 FAM49BQ9NUQ9 324 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 EHD2Q9NZN4 543 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 TBX21Q9UL17 535 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 RAB21Q9UL25 225 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 CDH9Q9ULB4 789 aa15.27■□□□□ 0.04
ZEB1-218ENST00000560196 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
ZEB1-218ENST00000560196 TANC1Q9C0D5 1861 aa15.27■□□□□ 0.03
ZEB1-218ENST00000560196 HCRTO43612 131 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 B3GAT3O94766 335 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
ZEB1-218ENST00000560196 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
ZEB1-218ENST00000560196 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 PDE4CQ08493 712 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 C2orf54Q08AI8 447 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 TRIM60Q495X7 471 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 METTL23Q86XA0 190 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 RHOT1Q8IXI2 618 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 COLGALT2Q8IYK4 626 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 CRIPAKQ8N1N5 446 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 SYT15Q9BQS2 421 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 PAAF1Q9BRP4 392 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 RBM12Q9NTZ6 932 aaKnown RBP15.26■□□□□ 0.03
ZEB1-218ENST00000560196 DDX43Q9NXZ2 648 aaKnown RBP15.26■□□□□ 0.03
ZEB1-218ENST00000560196 SMARCAL1Q9NZC9 954 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 CACNG4Q9UBN1 327 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 TJP2Q9UDY2 1190 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 PCDHB7Q9Y5E2 793 aa15.26■□□□□ 0.03
ZEB1-218ENST00000560196 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
ZEB1-218ENST00000560196 XPO1O14980 1071 aaKnown RBP15.25■□□□□ 0.03
ZEB1-218ENST00000560196 GJB6O95452 261 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 CCDC130P13994 396 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 MCM3P25205 808 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 RFC2P35250 354 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 PLA2G4AP47712 749 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 MARCKSL1P49006 195 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 ATN1P54259 1190 aaPredicted RBP15.25■□□□□ 0.03
ZEB1-218ENST00000560196 ZNF252P-AS1Q0IIN9 211 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 SEL1L2Q5TEA6 688 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 PMF1Q6P1K2 205 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 WDR93Q6P2C0 686 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 ACBD6Q9BR61 282 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 DUSP16Q9BY84 665 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 PARD6BQ9BYG5 372 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 TBC1D13Q9NVG8 400 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
ZEB1-218ENST00000560196 PCDHB8Q9UN66 801 aa15.25■□□□□ 0.03
ZEB1-218ENST00000560196 E5RJQ4 531 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms