RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RILPL1Q5EBL4 403 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 EFHC2Q5JST6 749 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 ARL6IP4Q66PJ3 421 aaKnown RBP9.41□□□□□ -0.9
VRK1-206ENST00000557222 USP37Q86T82 979 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 RALGPS2Q86X27 583 aaPredicted RBP9.41□□□□□ -0.9
VRK1-206ENST00000557222 YAF2Q8IY57 180 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 SHKBP1Q8TBC3 707 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 CSGALNACT1Q8TDX6 532 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 ZBTB45Q96K62 511 aaPredicted RBP9.41□□□□□ -0.9
VRK1-206ENST00000557222 ZSWIM3Q96MP5 696 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 MMTAG2Q9BU76 263 aaKnown RBP9.41□□□□□ -0.9
VRK1-206ENST00000557222 ZNF358Q9NW07 568 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 NDRG2Q9UN36 371 aaKnown RBP9.41□□□□□ -0.9
VRK1-206ENST00000557222 KIF3AQ9Y496 699 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 YIPF1Q9Y548 306 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 PCDHB6Q9Y5E3 794 aa9.41□□□□□ -0.9
VRK1-206ENST00000557222 MYBPHLA2RUH7 354 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 SFI1A8K8P3 1242 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 PIGRP01833 764 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 NEFLP07196 543 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 CDC25AP30304 524 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 VIPR2P41587 438 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 SLC12A3P55017 1021 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 NCKAP1LP55160 1127 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 ATP2C1P98194 919 aaPredicted RBP9.4□□□□□ -0.9
VRK1-206ENST00000557222 POU5F1Q01860 360 aaKnown RBP9.4□□□□□ -0.9
VRK1-206ENST00000557222 PPP2R3AQ06190 1150 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 SMARCB1Q12824 385 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 TEAD2Q15562 447 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 IL17AQ16552 155 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 ARHGAP29Q52LW3 1261 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 CENPPQ6IPU0 288 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 TSSK4Q6SA08 328 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 KCNK18Q7Z418 384 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 HAUS6Q7Z4H7 955 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 ITIH5Q86UX2 942 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 TMC8Q8IU68 726 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 NETO1Q8TDF5 533 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 PSMG2Q969U7 264 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 ACDQ96AP0 544 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 ANKFY1Q9P2R3 1169 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 ODF2LQ9ULJ1 636 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 USP18Q9UMW8 372 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 DERAQ9Y315 318 aa9.4□□□□□ -0.9
VRK1-206ENST00000557222 PDCD11Q14690 1871 aaKnown RBP9.4□□□□□ -0.91
VRK1-206ENST00000557222 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 CCDC163A0A0D9SF12 145 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 PP2D1A8MPX8 630 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 OGTO15294 1046 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 ATP9BO43861 1147 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 VNN2O95498 520 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 CYP11A1P05108 521 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 PLA2G4BP0C869 781 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 CXCL8P10145 99 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 CCNE1P24864 410 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 TUFMP49411 452 aaKnown RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 DUSP4Q13115 394 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 PTPAQ15257 358 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 CSRP2Q16527 193 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 ARHGAP15Q53QZ3 475 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 SPATA1Q5VX52 437 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 OVOS1Q6IE37 1185 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 ARMCX5Q6P1M9 558 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 DSTYKQ6XUX3 929 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 DNAJB7Q7Z6W7 309 aaPredicted RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 ARID3BQ8IVW6 561 aaPredicted RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 C2orf15Q8WU43 125 aaKnown RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 DDX1Q92499 740 aaKnown RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 AK8Q96MA6 479 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 SLITRK6Q9H5Y7 841 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 RPF1Q9H9Y2 349 aaKnown RBP9.39□□□□□ -0.91
VRK1-206ENST00000557222 PARD6AQ9NPB6 346 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 TUBGCP4Q9UGJ1 667 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 DSEQ9UL01 958 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 CEP295Q9C0D2 2601 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 COL4A2P08572 1712 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 MYH11P35749 1972 aa9.39□□□□□ -0.91
VRK1-206ENST00000557222 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 A0A0B4J269 797 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 MTMR11A4FU01 709 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 SLC30A4O14863 429 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 FAM189A1O60320 539 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 ODC1P11926 461 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 CDC25CP30307 473 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 MATR3P43243 847 aaKnown RBP eCLIP9.38□□□□□ -0.918e-6■□□□□ 8.9
VRK1-206ENST00000557222 LIG4P49917 911 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 KPNA1P52294 538 aaPredicted RBP9.38□□□□□ -0.91
VRK1-206ENST00000557222 ZNF131P52739 623 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 MARSP56192 900 aaKnown RBP9.38□□□□□ -0.91
VRK1-206ENST00000557222 LILRA4P59901 499 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 SATB1Q01826 763 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 SIM2Q14190 667 aaPredicted RBP9.38□□□□□ -0.91
VRK1-206ENST00000557222 TMEM119Q4V9L6 283 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 GAREM2Q75VX8 874 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms