RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 KIAA1683Q9H0B3 1180 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 ASCC2Q9H1I8 757 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 KCNMB3Q9NPA1 279 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 GDF3Q9NR23 364 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 HOXC10Q9NYD6 342 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 SUCLA2Q9P2R7 463 aaPredicted RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 EXOC7Q9UPT5 735 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 PTPN22Q9Y2R2 807 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 MRPL11Q9Y3B7 192 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 RRP15Q9Y3B9 282 aaKnown RBP6.57□□□□□ -1.36
CPSF2-205ENST00000556622 FOCADQ5VW36 1801 aa6.57□□□□□ -1.36
CPSF2-205ENST00000556622 DOCK1Q14185 1865 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 LRRIQ3A6PVS8 624 aaPredicted RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 H0YCG3 227 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MYO1CO00159 1063 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MAPK13O15264 365 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MOCS3O95396 460 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 KRT1P04264 644 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 EEF2P13639 858 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 CYP11B2P19099 503 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MAN1A1P33908 653 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 RDXP35241 583 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 CCNFP41002 786 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 DRG2P55039 364 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 ICA1Q05084 483 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 CLCQ05315 142 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 IKQ13123 557 aaPredicted RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 COL9A2Q14055 689 aaPredicted RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 DHX34Q14147 1143 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 PTPN21Q16825 1174 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 SEZ6Q53EL9 994 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 KLHDC7AQ5VTJ3 777 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 ALKBH5Q6P6C2 394 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 BTNL9Q6UXG8 535 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 CATSPERGQ6ZRH7 1159 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 PEX26Q7Z412 305 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 RPAINQ86UA6 219 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 CNPY4Q8N129 248 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 USP38Q8NB14 1042 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 GPRC5AQ8NFJ5 357 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 RAET1EQ8TD07 263 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 COA7Q96BR5 231 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 Q96M66 194 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 LRRC1Q9BTT6 524 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 STK33Q9BYT3 514 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 ARHGAP39Q9C0H5 1083 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 ISCUQ9H1K1 167 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 ZHX3Q9H4I2 956 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 HOMER3Q9NSC5 361 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 TBC1D7Q9P0N9 293 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 LARSQ9P2J5 1176 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MTRF1LQ9UGC7 380 aaKnown RBP6.56□□□□□ -1.36
CPSF2-205ENST00000556622 RSPH14Q9UHP6 348 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 AMFRQ9UKV5 643 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 MTUS1Q9ULD2 1270 aa6.56□□□□□ -1.36
CPSF2-205ENST00000556622 PHIPQ8WWQ0 1821 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 ATAD5Q96QE3 1844 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 FRMPD2Q68DX3 1309 aaPredicted RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 A0A1W2PRG0 241 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 CCDC169A6NNP5 214 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TMCO5BA8MYB1 307 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 H3BQF6 201 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TNPO2O14787 897 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PMM2O15305 246 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 EIF3HO15372 352 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PALMO75781 387 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PRPF6O94906 941 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 HEXIM1O94992 359 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TDP2O95551 362 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SYF2O95926 243 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TMEM253P0C7T8 217 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 C1QTNF9P0C862 333 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 POLR2MP0CAP2 368 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 UCHL3P15374 230 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 CETN2P41208 172 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SLC12A3P55017 1021 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 HADHBP55084 474 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PRMT2P55345 433 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 CORO7P57737 925 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 GFPT1Q06210 699 aaPredicted RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TNK2Q07912 1038 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 HLTFQ14527 1009 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 COG2Q14746 738 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SLMAPQ14BN4 828 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PLCB4Q15147 1175 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TCEAL1Q15170 157 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 KCNMB1Q16558 191 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TTC31Q49AM3 519 aaPredicted RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 ODF2Q5BJF6 829 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 AGBL2Q5U5Z8 902 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SYDE2Q5VT97 1194 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 KDM7AQ6ZMT4 941 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SYDE1Q6ZW31 735 aaPredicted RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 INTS8Q75QN2 995 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 NIPA1Q7RTP0 329 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SPICE1Q8N0Z3 855 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 OTUD6BQ8N6M0 293 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 ANKS4BQ8N8V4 417 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms