RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SMYD5Q6GMV2 418 aa15.05■□□□□ -0
SNX6-206ENST00000556162 C12orf76Q8N812 135 aaPredicted RBP15.05■□□□□ -0
SNX6-206ENST00000556162 CYFIP2Q96F07 1278 aa15.05■□□□□ -0
SNX6-206ENST00000556162 SEPT5Q99719 369 aaPredicted RBP15.05■□□□□ -0
SNX6-206ENST00000556162 MED10Q9BTT4 135 aa15.05■□□□□ -0
SNX6-206ENST00000556162 CRISPLD1Q9H336 500 aa15.05■□□□□ -0
SNX6-206ENST00000556162 KIAA1257Q9ULG3 409 aa15.05■□□□□ -0
SNX6-206ENST00000556162 DAAM1Q9Y4D1 1078 aa15.05■□□□□ -0
SNX6-206ENST00000556162 INSL5Q9Y5Q6 135 aa15.05■□□□□ -0
SNX6-206ENST00000556162 ATP8B3O60423 1300 aa15.04■□□□□ -0
SNX6-206ENST00000556162 H3BQ06 376 aaPredicted RBP15.04■□□□□ -0
SNX6-206ENST00000556162 CBFA2T2O43439 604 aa15.04■□□□□ -0
SNX6-206ENST00000556162 HNRNPA1P09651 372 aaKnown RBP eCLIP15.04■□□□□ -0
SNX6-206ENST00000556162 HAPLN1P10915 354 aaPredicted RBP15.04■□□□□ -0
SNX6-206ENST00000556162 BDNFP23560 247 aa15.04■□□□□ -0
SNX6-206ENST00000556162 CYP2F1P24903 491 aa15.04■□□□□ -0
SNX6-206ENST00000556162 HOXA9P31269 272 aa15.04■□□□□ -0
SNX6-206ENST00000556162 USP8P40818 1118 aa15.04■□□□□ -0
SNX6-206ENST00000556162 PLD1Q13393 1074 aa15.04■□□□□ -0
SNX6-206ENST00000556162 SYCE2Q6PIF2 218 aa15.04■□□□□ -0
SNX6-206ENST00000556162 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
SNX6-206ENST00000556162 RBBP8NLQ8NC74 664 aaPredicted RBP15.04■□□□□ -0
SNX6-206ENST00000556162 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
SNX6-206ENST00000556162 SHC3Q92529 594 aa15.04■□□□□ -0
SNX6-206ENST00000556162 MSLNLQ96KJ4 702 aa15.04■□□□□ -0
SNX6-206ENST00000556162 NAA15Q9BXJ9 866 aaKnown RBP15.04■□□□□ -0
SNX6-206ENST00000556162 B3GNT5Q9BYG0 378 aa15.04■□□□□ -0
SNX6-206ENST00000556162 CNTN6Q9UQ52 1028 aa15.04■□□□□ -0
SNX6-206ENST00000556162 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
SNX6-206ENST00000556162 RNF225M0QZC1 329 aaPredicted RBP15.03■□□□□ -0
SNX6-206ENST00000556162 NOL4O94818 638 aa15.03■□□□□ -0
SNX6-206ENST00000556162 PAEPP09466 180 aa15.03■□□□□ -0
SNX6-206ENST00000556162 CD19P15391 556 aa15.03■□□□□ -0
SNX6-206ENST00000556162 POLR2FP61218 127 aaKnown RBP15.03■□□□□ -0
SNX6-206ENST00000556162 ITIH3Q06033 890 aa15.03■□□□□ -0
SNX6-206ENST00000556162 DRAP1Q14919 205 aaPredicted RBP15.03■□□□□ -0
SNX6-206ENST00000556162 RARS2Q5T160 578 aaKnown RBP15.03■□□□□ -0
SNX6-206ENST00000556162 CES5AQ6NT32 575 aa15.03■□□□□ -0
SNX6-206ENST00000556162 VSTM1Q6UX27 236 aa15.03■□□□□ -0
SNX6-206ENST00000556162 TTC9BQ8N6N2 239 aa15.03■□□□□ -0
SNX6-206ENST00000556162 SLC2A14Q8TDB8 520 aa15.03■□□□□ -0
SNX6-206ENST00000556162 APOL5Q9BWW9 433 aa15.03■□□□□ -0
SNX6-206ENST00000556162 STK33Q9BYT3 514 aa15.03■□□□□ -0
SNX6-206ENST00000556162 PRKD2Q9BZL6 878 aa15.03■□□□□ -0
SNX6-206ENST00000556162 XPO4Q9C0E2 1151 aaKnown RBP15.03■□□□□ -0
SNX6-206ENST00000556162 GANQ9H2C0 597 aa15.03■□□□□ -0
SNX6-206ENST00000556162 FAM49BQ9NUQ9 324 aa15.03■□□□□ -0
SNX6-206ENST00000556162 CD207Q9UJ71 328 aa15.03■□□□□ -0
SNX6-206ENST00000556162 AJAP1Q9UKB5 411 aaPredicted RBP15.03■□□□□ -0
SNX6-206ENST00000556162 YIPF1Q9Y548 306 aa15.03■□□□□ -0
SNX6-206ENST00000556162 PLXNA3P51805 1871 aa15.03■□□□□ -0
SNX6-206ENST00000556162 FOXN3O00409 490 aaPredicted RBP15.03■□□□□ -0
SNX6-206ENST00000556162 CLDN5O00501 218 aa15.03■□□□□ -0
SNX6-206ENST00000556162 XYLBO75191 536 aa15.03■□□□□ -0
SNX6-206ENST00000556162 VDRP11473 427 aa15.03■□□□□ -0
SNX6-206ENST00000556162 CCDC130P13994 396 aa15.03■□□□□ -0
SNX6-206ENST00000556162 GRIK1P39086 918 aa15.03■□□□□ -0
SNX6-206ENST00000556162 MAGEA11P43364 429 aa15.03■□□□□ -0
SNX6-206ENST00000556162 EPHB3P54753 998 aa15.03■□□□□ -0
SNX6-206ENST00000556162 RPL10AP62906 217 aaKnown RBP15.03■□□□□ -0
SNX6-206ENST00000556162 TWF1Q12792 350 aa15.03■□□□□ -0
SNX6-206ENST00000556162 CLUL1Q15846 466 aa15.03■□□□□ -0
SNX6-206ENST00000556162 PTPN21Q16825 1174 aa15.03■□□□□ -0
SNX6-206ENST00000556162 SGO2Q562F6 1265 aa15.03■□□□□ -0
SNX6-206ENST00000556162 FUKQ8N0W3 1084 aa15.03■□□□□ -0
SNX6-206ENST00000556162 ELMOD1Q8N336 334 aa15.03■□□□□ -0
SNX6-206ENST00000556162 HNRNPABQ99729 332 aaKnown RBP15.03■□□□□ -0
SNX6-206ENST00000556162 ZNF518BQ9C0D4 1074 aa15.03■□□□□ -0
SNX6-206ENST00000556162 ADAM7Q9H2U9 754 aa15.03■□□□□ -0
SNX6-206ENST00000556162 PIDD1Q9HB75 910 aa15.03■□□□□ -0
SNX6-206ENST00000556162 NLRC4Q9NPP4 1024 aa15.03■□□□□ -0
SNX6-206ENST00000556162 EPHB6O15197 1021 aa15.02■□□□□ -0
SNX6-206ENST00000556162 CCL16O15467 120 aa15.02■□□□□ -0
SNX6-206ENST00000556162 SOAT2O75908 522 aa15.02■□□□□ -0
SNX6-206ENST00000556162 ZNF132P52740 706 aa15.02■□□□□ -0
SNX6-206ENST00000556162 PPP1R26Q5T8A7 1209 aaPredicted RBP15.02■□□□□ -0
SNX6-206ENST00000556162 CYP26C1Q6V0L0 522 aa15.02■□□□□ -0
SNX6-206ENST00000556162 PAQR9Q6ZVX9 377 aa15.02■□□□□ -0
SNX6-206ENST00000556162 CACNA2D4Q7Z3S7 1137 aa15.02■□□□□ -0
SNX6-206ENST00000556162 SCN4BQ8IWT1 228 aa15.02■□□□□ -0
SNX6-206ENST00000556162 SMARCD1Q96GM5 515 aa15.02■□□□□ -0
SNX6-206ENST00000556162 ZNF512Q96ME7 567 aaPredicted RBP15.02■□□□□ -0
SNX6-206ENST00000556162 SPAG5Q96R06 1193 aa15.02■□□□□ -0
SNX6-206ENST00000556162 RHOBTB2Q9BYZ6 727 aa15.02■□□□□ -0
SNX6-206ENST00000556162 S1PR5Q9H228 398 aa15.02■□□□□ -0
SNX6-206ENST00000556162 PRDM6Q9NQX0 595 aa15.02■□□□□ -0
SNX6-206ENST00000556162 BRWD1Q9NSI6 2320 aa15.02□□□□□ -0.01
SNX6-206ENST00000556162 MTCL1Q9Y4B5 1905 aaKnown RBP15.02□□□□□ -0.01
SNX6-206ENST00000556162 ADORA2BP29275 332 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 DDR2Q16832 855 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 ATAT1Q5SQI0 421 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 ARHGAP17Q68EM7 881 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 GPR149Q86SP6 731 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 FAM35AQ86V20 835 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 FAM71AQ8IYT1 594 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 SMRP1Q8NCR6 262 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 SMG7Q92540 1137 aaKnown RBP15.01□□□□□ -0.01
SNX6-206ENST00000556162 ZNF707Q96C28 371 aaPredicted RBP15.01□□□□□ -0.01
SNX6-206ENST00000556162 ASB3Q9Y575 518 aa15.01□□□□□ -0.01
SNX6-206ENST00000556162 TRIM66O15016 1216 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms