RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TCHHQ07283 1943 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 SLC38A8A6NNN8 435 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 POLR2DO15514 142 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 STAU1O95793 577 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 PFKLP17858 780 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 HOXA6P31267 233 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 CXCL12P48061 93 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 CCINQ13939 588 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 PSMD6Q15008 389 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 ITPRIPL2Q3MIP1 535 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 RESP18Q5W5W9 173 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 VSTM1Q6UX27 236 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 HS2ST1Q7LGA3 356 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 TRAPPC11Q7Z392 1133 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 SPATA2LQ8IUW3 424 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 XXYLT1Q8NBI6 393 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 SCFD1Q8WVM8 642 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 KBTBD7Q8WVZ9 684 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 SECISBP2LQ93073 1101 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 GTF3C4Q9UKN8 822 aa13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 KIF26AQ9ULI4 1882 aaPredicted RBP13.61□□□□□ -0.23
HNRNPC-221ENST00000555883 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 TACC1O75410 805 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 TCF3P15923 654 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 WARSP23381 471 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 CYP2F1P24903 491 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 CNR2P34972 360 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 ME1P48163 572 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 AMPD2Q01433 879 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 GAS6Q14393 721 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 DDR2Q16832 855 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 SCARA3Q6AZY7 606 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 TXNDC11Q6PKC3 985 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 OSTM1Q86WC4 334 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 KIAA1958Q8N8K9 716 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 MAB21L3Q8N8X9 362 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 GOLGA5Q8TBA6 731 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 NOC3LQ8WTT2 800 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 USP13Q92995 863 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 ZFYVE19Q96K21 471 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 FNBP1Q96RU3 617 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 CGRRF1Q99675 332 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 EHD2Q9NZN4 543 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 SMG5Q9UPR3 1016 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-221ENST00000555883 CACNA1AO00555 2505 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 TADA3O75528 432 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 MYL1P05976 194 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 ACAT1P24752 427 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 ATICP31939 592 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 SOX9P48436 509 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 GPR15P49685 360 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 PDE6CP51160 858 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 FAM160A1Q05DH4 1040 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 CYP24A1Q07973 514 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 RUNX3Q13761 415 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 PDGFRLQ15198 375 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 KNOP1Q1ED39 458 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 LMBRD2Q68DH5 695 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 TSSK4Q6SA08 328 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 FSIP1Q8NA03 581 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 SYT15Q9BQS2 421 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 NCDNQ9UBB6 729 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 MAGEC2Q9UBF1 373 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 RCOR1Q9UKL0 485 aa13.59□□□□□ -0.23
HNRNPC-221ENST00000555883 TRDMT1O14717 391 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 TNNI1P19237 187 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 SDHBP21912 280 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 PPP3CCP48454 512 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 AP3M2P53677 418 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 CLDN10P78369 228 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 TNK2Q07912 1038 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 PSMD2Q13200 908 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 TMEM196Q5HYL7 178 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 TXNDC8Q6A555 127 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 KIAA2013Q8IYS2 634 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 CEP57L1Q8IYX8 460 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 MYCBPAPQ8TBZ2 947 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 EXOC4Q96A65 974 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 SMG9Q9H0W8 520 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 CRTAC1Q9NQ79 661 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 DLL3Q9NYJ7 618 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 USP25Q9UHP3 1055 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 CCL26Q9Y258 94 aa13.58□□□□□ -0.24
HNRNPC-221ENST00000555883 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 CCDC163A0A0D9SF12 145 aa13.57□□□□□ -0.24
HNRNPC-221ENST00000555883 K7ESF4 209 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms