RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ALDH1A3P47895 512 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 NASPP49321 788 aaPredicted RBP11.66□□□□□ -0.54
TDP1-212ENST00000555565 TAF6P49848 677 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 EPHB3P54753 998 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 ARMCX5Q6P1M9 558 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 PDILTQ8N807 584 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 LINC00301Q8NCQ3 95 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 SAAL1Q96ER3 474 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 ACCSQ96QU6 501 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 FAM83CQ9BQN1 747 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 PYM1Q9BRP8 204 aaKnown RBP11.66□□□□□ -0.54
TDP1-212ENST00000555565 FAM213AQ9BRX8 229 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 SLITRK6Q9H5Y7 841 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 EXOC7Q9UPT5 735 aa11.66□□□□□ -0.54
TDP1-212ENST00000555565 CYB561D2O14569 222 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 TRDMT1O14717 391 aaKnown RBP11.65□□□□□ -0.54
TDP1-212ENST00000555565 IL18RAPO95256 599 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 CDR1P51861 262 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 CREB5Q02930 508 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 PLD1Q13393 1074 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 SLC39A12Q504Y0 691 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 SOWAHCQ53LP3 525 aaPredicted RBP11.65□□□□□ -0.54
TDP1-212ENST00000555565 DAB2IPQ5VWQ8 1189 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 DNAJB7Q7Z6W7 309 aaPredicted RBP11.65□□□□□ -0.54
TDP1-212ENST00000555565 LRRTM3Q86VH5 581 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 NT5DC4Q86YG4 428 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 BRSK2Q8IWQ3 736 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 BPIFB1Q8TDL5 484 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
TDP1-212ENST00000555565 EZH1Q92800 747 aaPredicted RBP11.65□□□□□ -0.54
TDP1-212ENST00000555565 PSMG2Q969U7 264 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 ZCWPW1Q9H0M4 648 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 HPS4Q9NQG7 708 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 PANK4Q9NVE7 773 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 TFIP11Q9UBB9 837 aaKnown RBP11.65□□□□□ -0.54
TDP1-212ENST00000555565 HSFX1Q9UBD0 423 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 EBF1Q9UH73 591 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 DSEQ9UL01 958 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 SLC8A2Q9UPR5 921 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 ASB3Q9Y575 518 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
TDP1-212ENST00000555565 FAM221BA6H8Z2 402 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 GOLGA8IPA6NC78 632 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 GOLGA8JA6NMD2 632 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 KPNA7A9QM74 516 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 PATE3B3GLJ2 98 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 SPTLC2O15270 562 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 ATG13O75143 517 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 EGFP01133 1207 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 GARTP22102 1010 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 PLCB2Q00722 1185 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 ALCAMQ13740 583 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 STK38Q15208 465 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 E2F4Q16254 413 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 NAIF1Q69YI7 327 aaPredicted RBP11.64□□□□□ -0.55
TDP1-212ENST00000555565 SCARA3Q6AZY7 606 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 METTL23Q86XA0 190 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 C1orf127Q8N9H9 656 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 GLIS3Q8NEA6 775 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 FAM84AQ96KN4 292 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 HHIPQ96QV1 700 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 GKN1Q9NS71 199 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 MSRB2Q9Y3D2 182 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 NEUROG3Q9Y4Z2 214 aa11.64□□□□□ -0.55
TDP1-212ENST00000555565 GCN1Q92616 2671 aaKnown RBP11.64□□□□□ -0.55
TDP1-212ENST00000555565 KIF26AQ9ULI4 1882 aaPredicted RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 HYAL3O43820 417 aaPredicted RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 RNF40O75150 1001 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 PPP6R2O75170 966 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 RHOBTB1O94844 696 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 PRPF6O94906 941 aaKnown RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 LDHAP00338 332 aaKnown RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 ITGB3P05106 788 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 ATF6P18850 670 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 POLR2BP30876 1174 aaKnown RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 TUFMP49411 452 aaKnown RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 IRX4P78413 519 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 TFAMQ00059 246 aaKnown RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 GRSF1Q12849 480 aaKnown RBP eCLIP11.63□□□□□ -0.55
TDP1-212ENST00000555565 SV2CQ496J9 727 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 ITIH5Q86UX2 942 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 CCDC65Q8IXS2 484 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 THEM5Q8N1Q8 247 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 DEFB124Q8NES8 71 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 RIN3Q8TB24 985 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 SNX21Q969T3 373 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 SEPT5Q99719 369 aaPredicted RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 LPIN3Q9BQK8 851 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 SLC46A2Q9BY10 475 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 ATXN3LQ9H3M9 355 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 PCIF1Q9H4Z3 704 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms