RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 DPP3Q9NY33 737 aa12.46□□□□□ -0.41
TUBB3-204ENST00000554116 ABI2Q9NYB9 513 aaPredicted RBP12.46□□□□□ -0.41
TUBB3-204ENST00000554116 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
TUBB3-204ENST00000554116 HELZP42694 1942 aaKnown RBP12.46□□□□□ -0.42
TUBB3-204ENST00000554116 PCNX2A6NKB5 2137 aa12.46□□□□□ -0.42
TUBB3-204ENST00000554116 BPTFQ12830 3046 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 GIPC1O14908 333 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 SLC26A4O43511 780 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 AKAP3O75969 853 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 CYP2F1P24903 491 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 MPLP40238 635 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 PI4KAP42356 2102 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 TAF6P49848 677 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 CEBPZQ03701 1054 aaKnown RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 ZNF268Q14587 947 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 ZNF77Q15935 545 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 USP49Q70CQ1 688 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 OSTM1Q86WC4 334 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 CAMKK1Q8N5S9 505 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 RAD54LQ92698 747 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 PI4K2AQ9BTU6 479 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 ST6GALNAC4Q9H4F1 302 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 ZSCAN16Q9H4T2 348 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 PARVGQ9HBI0 331 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 THG1LQ9NWX6 298 aaKnown RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 GCNT4Q9P109 453 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 DSEQ9UL01 958 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 L1RE1Q9UN81 338 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 PCDHGA5Q9Y5G8 931 aa12.45□□□□□ -0.42
TUBB3-204ENST00000554116 TNRC6BQ9UPQ9 1833 aaKnown RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 MYO18AQ92614 2054 aaKnown RBP12.45□□□□□ -0.42
TUBB3-204ENST00000554116 IGSF10Q6WRI0 2623 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 KPNA7A9QM74 516 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 NOL4O94818 638 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 FAM13AO94988 1023 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
TUBB3-204ENST00000554116 HNRNPLP14866 589 aaKnown RBP eCLIP12.44□□□□□ -0.42
TUBB3-204ENST00000554116 PLCG1P19174 1290 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 MESP2Q0VG99 397 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 GRSF1Q12849 480 aaKnown RBP eCLIP12.44□□□□□ -0.42
TUBB3-204ENST00000554116 VEPH1Q14D04 833 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
TUBB3-204ENST00000554116 PTPAQ15257 358 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 DDR2Q16832 855 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 EML3Q32P44 896 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 ADALQ6DHV7 355 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 SYT13Q7L8C5 426 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 ZNF720Q7Z2F6 126 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 RPLP0P6Q8NHW5 317 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 MYRFLQ96LU7 910 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 LINC00597Q9H2U6 94 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 EBF1Q9UH73 591 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 AGO2Q9UKV8 859 aaKnown RBP12.44□□□□□ -0.42
TUBB3-204ENST00000554116 ZMIZ1Q9ULJ6 1067 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 SLC8A2Q9UPR5 921 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 PCDHB5Q9Y5E4 795 aa12.44□□□□□ -0.42
TUBB3-204ENST00000554116 BCLAF3A2AJT9 711 aaKnown RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 TMEM8BA6NDV4 472 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 SOBPA7XYQ1 873 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 ATG13O75143 517 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 TOP3BO95985 862 aaKnown RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 CCDC192P0DO97 292 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 DRD1P21728 446 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 SCP2P22307 547 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 ACAT1P24752 427 aaKnown RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 DDX6P26196 483 aaKnown RBP eCLIP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 AVPR1AP37288 418 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 SMARCB1Q12824 385 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 USP4Q13107 963 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 MTF1Q14872 753 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 SFTPA1Q8IWL2 248 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 THEM5Q8N1Q8 247 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 TRMT2BQ96GJ1 504 aaKnown RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 KIF9Q9HAQ2 790 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 VPS45Q9NRW7 570 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 GTF3C4Q9UKN8 822 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 SRPRBQ9Y5M8 271 aaKnown RBP12.43□□□□□ -0.42
TUBB3-204ENST00000554116 WNT6Q9Y6F9 365 aa12.43□□□□□ -0.42
TUBB3-204ENST00000554116 LNP1A1A4G5 178 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 C2orf78A6NCI8 922 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 C1QTNF9BB2RNN3 333 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 PATE3B3GLJ2 98 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 K7EQS6 105 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 CDX4O14627 284 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-204ENST00000554116 GABRDO14764 452 aa12.42□□□□□ -0.42
TUBB3-204ENST00000554116 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms