RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ATP5JP18859 108 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 DNAJA1P31689 397 aaKnown RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 SLC16A2P36021 539 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 NOVP48745 357 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 MRE11P49959 708 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 JAM2P57087 298 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 BAATQ14032 418 aaPredicted RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 PCOLCEQ15113 449 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 UBE3CQ15386 1083 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 FSCN1Q16658 493 aaKnown RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 TRIM71Q2Q1W2 868 aaKnown RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 FIGNQ5HY92 759 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 VPS53Q5VIR6 699 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 KANK2Q63ZY3 851 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CCDC174Q6PII3 467 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 SLC30A10Q6XR72 485 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 MAMDC2Q7Z304 686 aaPredicted RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 ZNF575Q86XF7 245 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 LDLRAD3Q86YD5 345 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 TMEM199Q8N511 208 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 MSL3Q8N5Y2 521 aaKnown RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 PCDH19Q8TAB3 1148 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 NUP133Q8WUM0 1156 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 ARNTL2Q8WYA1 636 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 LARP4BQ92615 738 aaKnown RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 FBXW5Q969U6 566 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CCDC17Q96LX7 622 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 BTBD2Q9BX70 525 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 AMNQ9BXJ7 453 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 TEX13BQ9BXU2 312 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CPVLQ9H3G5 476 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 ZNF703Q9H7S9 590 aaPredicted RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 KANSL2Q9H9L4 492 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 SLC28A3Q9HAS3 691 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 ATP8A2Q9NTI2 1148 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CATSPERZQ9NTU4 200 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 ZBTB40Q9NUA8 1239 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CYP39A1Q9NYL5 469 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 COL20A1Q9P218 1284 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CBLCQ9ULV8 474 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CNPY2Q9Y2B0 182 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 PCDHA8Q9Y5H6 950 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 SIP14410 1827 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 TNKSO95271 1327 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 A0A0G2JNJ9 132 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 LINC01553A4QN01 128 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 PRAMEF25A6NGN4 478 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 TMEM232C9JQI7 657 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 ZNF561-AS1K7EIQ3 104 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 AQP7O14520 342 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 KCNK3O14649 394 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 IGSF3O75054 1194 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 ADH4P08319 380 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 ALAS1P13196 640 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 KRT15P19012 456 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 MCCP23508 829 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 EDNRBP24530 442 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 GTF2F1P35269 517 aaKnown RBP eCLIP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 ALDH5A1P51649 535 aaPredicted RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 NANOS3P60323 173 aaKnown RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 WDR5P61964 334 aaKnown RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 CD83Q01151 205 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 HGFACQ04756 655 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 GRM7Q14831 915 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 RAB30Q15771 203 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 SLC35G1Q2M3R5 365 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 TMEM31Q5JXX7 168 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 TMEM200BQ69YZ2 307 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 CCDC62Q6P9F0 684 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 LRSAM1Q6UWE0 723 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 FILIP1Q7Z7B0 1213 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 HERC6Q8IVU3 1022 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 ANKRD35Q8N283 1001 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 PRPF38AQ8NAV1 312 aaKnown RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 PCSK9Q8NBP7 692 aaKnown RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 ZNF483Q8TF39 744 aaPredicted RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 PTPRN2Q92932 1015 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 C17orf80Q9BSJ5 609 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 OR10A2Q9H208 303 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 NELFAQ9H3P2 528 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 AURKAIP1Q9NWT8 199 aaPredicted RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 SLC5A4Q9NY91 659 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 CEP72Q9P209 647 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 HECAQ9UBI9 543 aaPredicted RBP3.73□□□□□ -1.81
SLIRP-202ENST00000553981 Q9UFV3 132 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 MSRAQ9UJ68 235 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 PLIN4Q96Q06 1357 aa3.73□□□□□ -1.81
SLIRP-202ENST00000553981 TTC28Q96AY4 2481 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MROH7Q68CQ1 1323 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 FRMPD2Q68DX3 1309 aaPredicted RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 SALL3Q9BXA9 1300 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 TECTAO75443 2155 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MICAL3Q7RTP6 2002 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 CHD9Q3L8U1 2897 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 H3BQ06 376 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms