RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 SPATA2LQ8IUW3 424 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-203ENST00000553967 GLIS3Q8NEA6 775 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 ANKRD36BP1Q96IX9 119 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 LRRC27Q9C0I9 530 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 EBF3Q9H4W6 596 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 PARD6AQ9NPB6 346 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 HPS4Q9NQG7 708 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 INTS13Q9NVM9 706 aa16.95■□□□□ 0.3
TUBB3-203ENST00000553967 R3HCC1Q9Y3T6 440 aaKnown RBP16.95■□□□□ 0.3
TUBB3-203ENST00000553967 OTOL1A6NHN0 477 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-203ENST00000553967 ZNF233A6NK53 670 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 SPTLC2O15270 562 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 HCRTO43612 131 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 NOL4O94818 638 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 RETP07949 1114 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
TUBB3-203ENST00000553967 ZNF268Q14587 947 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-203ENST00000553967 SURF1Q15526 300 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 E2F4Q16254 413 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 CFAP221Q4G0U5 840 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 TRIM68Q6AZZ1 485 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 CC2D1AQ6P1N0 951 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-203ENST00000553967 CBWD2Q8IUF1 395 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 OR5B17Q8NGF7 314 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
TUBB3-203ENST00000553967 HPDLQ96IR7 371 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 MYRFLQ96LU7 910 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 KBTBD4Q9NVX7 518 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 TFIP11Q9UBB9 837 aaKnown RBP16.94■□□□□ 0.3
TUBB3-203ENST00000553967 PTPRJQ12913 1337 aa16.94■□□□□ 0.3
TUBB3-203ENST00000553967 OBSL1O75147 1896 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 K7ELQ4 463 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-203ENST00000553967 PPP6R2O75170 966 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 TADA3O75528 432 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 TNNC2P02585 160 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 ARSAP15289 507 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 HOXA6P31267 233 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 HOXD13P35453 343 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 ATXN1P54253 815 aaKnown RBP16.93■□□□□ 0.3
TUBB3-203ENST00000553967 GRSF1Q12849 480 aaKnown RBP eCLIP16.93■□□□□ 0.3
TUBB3-203ENST00000553967 DUOXA2Q1HG44 320 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 TMEM196Q5HYL7 178 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 FAM171BQ6P995 826 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 DPH6Q7L8W6 267 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 SCN4BQ8IWT1 228 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 RIN3Q8TB24 985 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 CHFRQ96EP1 664 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 FUBP3Q96I24 572 aaKnown RBP eCLIP16.93■□□□□ 0.3
TUBB3-203ENST00000553967 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 CUEDC2Q9H467 287 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 TRPC7Q9HCX4 862 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 HSPBP1Q9NZL4 362 aa16.93■□□□□ 0.3
TUBB3-203ENST00000553967 CDV3Q9UKY7 258 aaKnown RBP16.93■□□□□ 0.3
TUBB3-203ENST00000553967 TRDMT1O14717 391 aaKnown RBP16.92■□□□□ 0.3
TUBB3-203ENST00000553967 ATP2C2O75185 946 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 LMO2P25791 158 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 HOXC13P31276 330 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 ASIC1P78348 528 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 AMPD3Q01432 767 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 AMPD2Q01433 879 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 PDGFRLQ15198 375 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 FSTL4Q6MZW2 842 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 LIMS2Q7Z4I7 341 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-203ENST00000553967 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 DHX58Q96C10 678 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-203ENST00000553967 CYP2S1Q96SQ9 504 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 KIAA1586Q9HCI6 787 aa16.92■□□□□ 0.3
TUBB3-203ENST00000553967 TRAV19A0A0A6YYK7 116 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 EIF3DO15371 548 aaKnown RBP eCLIP16.91■□□□□ 0.3
TUBB3-203ENST00000553967 LRP3O75074 770 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 USP17L7P0C7H9 530 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 MAGEA11P43364 429 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 PSMC1P62191 440 aaKnown RBP16.91■□□□□ 0.3
TUBB3-203ENST00000553967 FAM160A1Q05DH4 1040 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 PKN3Q6P5Z2 889 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 C4orf50Q6ZRC1 276 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 CEP68Q76N32 757 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-203ENST00000553967 WDR5BQ86VZ2 330 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 WDR49Q8IV35 697 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 FSIP1Q8NA03 581 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 SLC22A12Q96S37 553 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 SYT15Q9BQS2 421 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-203ENST00000553967 CDH9Q9ULB4 789 aa16.91■□□□□ 0.3
TUBB3-203ENST00000553967 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.91■□□□□ 0.3
TUBB3-203ENST00000553967 NCOR2Q9Y618 2525 aa16.9■□□□□ 0.3
TUBB3-203ENST00000553967 CUTAO60888 179 aa16.9■□□□□ 0.3
TUBB3-203ENST00000553967 ATG13O75143 517 aa16.9■□□□□ 0.3
TUBB3-203ENST00000553967 YEATS4O95619 227 aa16.9■□□□□ 0.3
TUBB3-203ENST00000553967 CKMP06732 381 aa16.9■□□□□ 0.3
TUBB3-203ENST00000553967 WARSP23381 471 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms