RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 TUBA3CQ13748 450 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZYXQ15942 572 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 PRR5LQ6MZQ0 368 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 KDELC2Q7Z4H8 507 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 APLFQ8IW19 511 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 SCUBE1Q8IWY4 988 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ESX1Q8N693 406 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 C2orf69Q8N8R5 385 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 LRRC45Q96CN5 670 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CCDC42Q96M95 316 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 RNF26Q9BY78 433 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 TAF1DQ9H5J8 278 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 PALMDQ9NP74 551 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 KMT5AQ9NQR1 393 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 GJB4Q9NTQ9 266 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 DZANK1Q9NVP4 752 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZSCAN32Q9NX65 697 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 DNAJB12Q9NXW2 375 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 AASSQ9UDR5 926 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SCOCQ9UIL1 159 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 KIAA1257Q9ULG3 409 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 EXOC7Q9UPT5 735 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 A0A0B4J203 849 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TTC34A8MYJ7 566 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 USP1O94782 785 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 EPHX1P07099 455 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SRGNP10124 158 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ANXA13P27216 316 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CAP2P40123 477 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ADCY8P40145 1251 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 NFIXQ14938 502 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TMEM132BQ14DG7 1078 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ANKRD39Q53RE8 183 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CEP78Q5JTW2 689 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAM26DQ5JW98 314 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 LDLRAD1Q5T700 205 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAM102BQ5T8I3 360 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 DCAF15Q66K64 600 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PPP4R3AQ6IN85 833 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FIP1L1Q6UN15 594 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 CHSY3Q70JA7 882 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 REC114Q7Z4M0 266 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 KIAA0907Q7Z7F0 614 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 ADGRA1Q86SQ6 560 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 C12orf40Q86WS4 652 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 LRRC43Q8N309 656 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAM156AQ8NDB6 213 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAM13CQ8NE31 585 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PPP2R3CQ969Q6 453 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TBC1D20Q96BZ9 403 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 EDC3Q96F86 508 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 UROC1Q96N76 676 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SEMA4AQ9H3S1 761 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 RNF41Q9H4P4 317 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 ARPP21Q9UBL0 812 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 TUBE1Q9UJT0 475 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAF1Q9UNN5 650 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 NIP7Q9Y221 180 aaKnown RBP eCLIP4.24□□□□□ -1.73
RDH11-204ENST00000553578 A0A1W2PQ67 120 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TTI1O43156 1089 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ARHGEF15O94989 841 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 NPTXRO95502 500 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CRTAMO95727 393 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CALM1P0DP23 149 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CALM2P0DP24 149 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CALM3P0DP25 149 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 RPS2P15880 293 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 S100A5P33763 92 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 HSPA1LP34931 641 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SARSP49591 514 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 ARF3P61204 181 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 ARF1P84077 181 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 PLOD1Q02809 727 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 PPARDQ03181 441 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PLAURQ03405 335 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TROAPQ12815 778 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CYTH1Q15438 398 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 STK11Q15831 433 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 USH1GQ495M9 461 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TMEM67Q5HYA8 995 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 HGSNATQ68CP4 663 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CCDC62Q6P9F0 684 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 APOA5Q6Q788 366 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CYB5R4Q7L1T6 521 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 NLRP9Q7RTR0 991 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PHLDB2Q86SQ0 1253 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 VPS36Q86VN1 386 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 LINC00469Q8N7U9 141 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PPP1R35Q8TAP8 253 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 NPLOC4Q8TAT6 608 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 OSCP1Q8WVF1 389 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ZNF566Q969W8 418 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ZBED3Q96IU2 234 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 EXOC2Q96KP1 924 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PRPF18Q99633 342 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 MIS12Q9H081 205 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CDH19Q9H159 772 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FKBP14Q9NWM8 211 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ATPIF1Q9UII2 106 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ANAPC5Q9UJX4 755 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms