RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 LAMA1P25391 3075 aa8.59□□□□□ -1.03
LETMD1-225ENST00000550715 APC2O95996 2303 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 CACNA1EQ15878 2313 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 CCDC195A0A1B0GUA6 201 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 SHISA7A6NL88 538 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 MEFVO15553 781 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-225ENST00000550715 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-225ENST00000550715 PPM1AP35813 382 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 RPS9P46781 194 aaKnown RBP8.58□□□□□ -1.04
LETMD1-225ENST00000550715 FNTBP49356 437 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 FAM189BP81408 668 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 RNF187Q5TA31 235 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-225ENST00000550715 PARM1Q6UWI2 310 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 SLC24A5Q71RS6 500 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 SLC7A14Q8TBB6 771 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 DCAF4Q8WV16 495 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 FGF14Q92915 247 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 LRIG1Q96JA1 1093 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 FAM49AQ9H0Q0 323 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-225ENST00000550715 ATP6V0A4Q9HBG4 840 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 PXMP2Q9NR77 195 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 RGS18Q9NS28 235 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 KLK13Q9UKR3 277 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 VAV3Q9UKW4 847 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 IRAK3Q9Y616 596 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 PLIN4Q96Q06 1357 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 DOCK6Q96HP0 2047 aa8.58□□□□□ -1.04
LETMD1-225ENST00000550715 URB1O60287 2271 aaKnown RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 PCNX2A6NKB5 2137 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 CLUHO75153 1309 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 WDR19Q8NEZ3 1342 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 IGSF9BQ9UPX0 1349 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 TEX15Q9BXT5 2789 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 MBLAC1A4D2B0 266 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 FGF10O15520 208 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 MED26O95402 600 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 TGFB3P10600 412 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 HOXC13P31276 330 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 METAP2P50579 478 aaKnown RBP eCLIP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 CLCN4P51793 760 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 LAPTM5Q13571 262 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 UBE3CQ15386 1083 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 EEF1DP3Q658K8 133 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 BRAPQ7Z569 592 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 TMEM173Q86WV6 379 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 NINJ1Q92982 152 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 MISP3Q96FF7 219 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 PTCHD1Q96NR3 888 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 PHF20Q9BVI0 1012 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 ZBP1Q9H171 429 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 ZNF287Q9HBT7 754 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 EPB41L4AQ9HCS5 686 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-225ENST00000550715 PAG1Q9NWQ8 432 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 PLAAQ9Y263 795 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 RAI2Q9Y5P3 530 aa8.57□□□□□ -1.04
LETMD1-225ENST00000550715 GREB1Q4ZG55 1949 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 DENND3A2RUS2 1198 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 ARNTLO00327 626 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 CTSAP10619 480 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 CD8BP10966 210 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 SDSP20132 328 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 KLRC2P26717 231 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 GABREP78334 506 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 PPFIA1Q13136 1202 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 FNDC3BQ53EP0 1204 aaKnown RBP8.56□□□□□ -1.04
LETMD1-225ENST00000550715 VSIG10LQ86VR7 867 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 CPNE8Q86YQ8 564 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 IL31RAQ8NI17 732 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 STAMQ92783 540 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 MFSD3Q96ES6 412 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 NELL2Q99435 816 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 PDCD2LQ9BRP1 358 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 TMEM117Q9H0C3 514 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 CPVLQ9H3G5 476 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 BOLA2Q9H3K6 86 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 IL1RAPL2Q9NP60 686 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 TMEM161AQ9NX61 479 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.56□□□□□ -1.04
LETMD1-225ENST00000550715 TUBE1Q9UJT0 475 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 TNNQ9UQP3 1299 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 NOC2LQ9Y3T9 749 aaKnown RBP8.56□□□□□ -1.04
LETMD1-225ENST00000550715 NEUROG3Q9Y4Z2 214 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 TRPV2Q9Y5S1 764 aa8.56□□□□□ -1.04
LETMD1-225ENST00000550715 SHROOM3Q8TF72 1996 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 LAMA4Q16363 1823 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 NPHP3-ACAD11A0A0J9YXS1 232 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 C4orf47A7E2U8 309 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 NCAM2O15394 837 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 ARHGAP6O43182 974 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 RFPL2O75678 378 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 CNPP09543 421 aaKnown RBP8.55□□□□□ -1.04
LETMD1-225ENST00000550715 HSPD1P10809 573 aaKnown RBP8.55□□□□□ -1.04
LETMD1-225ENST00000550715 LCP1P13796 627 aa8.55□□□□□ -1.04
LETMD1-225ENST00000550715 PAMP19021 973 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms