RNA–Protein interactions for RNA: ENST00000550464.5

PMEL-215, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PMEL, Length 1,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-215ENST00000550464 SEL1L2Q5TEA6 688 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 DCAF12L1Q5VU92 463 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
PMEL-215ENST00000550464 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
PMEL-215ENST00000550464 ZNF564Q8TBZ8 553 aaPredicted RBP13.55□□□□□ -0.24
PMEL-215ENST00000550464 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
PMEL-215ENST00000550464 LRRC45Q96CN5 670 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 TRIM11Q96F44 468 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 FAM84AQ96KN4 292 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 SH3GL2Q99962 352 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 ZSWIM1Q9BR11 485 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 NUP85Q9BW27 656 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 CNTN3Q9P232 1028 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
PMEL-215ENST00000550464 COL4A6Q14031 1691 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 SOX1O00570 391 aaPredicted RBP13.54□□□□□ -0.24
PMEL-215ENST00000550464 INPPL1O15357 1258 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 DDHD2O94830 711 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 PBX3P40426 434 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 GUCY2FP51841 1108 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
PMEL-215ENST00000550464 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 BRSK2Q8IWQ3 736 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
PMEL-215ENST00000550464 TATDN2Q93075 761 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 NKX2-4Q9H2Z4 354 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 CWH43Q9H720 699 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 PLEKHA5Q9HAU0 1116 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 FAM114A2Q9NRY5 505 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 DNAJB4Q9UDY4 337 aa13.54□□□□□ -0.24
PMEL-215ENST00000550464 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 TMEM110-MUSTN1A8MSY1 372 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 SPOPO43791 374 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 THP07101 528 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 NFICP08651 508 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 FAM153BP0C7A2 387 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 LINC00271P0C7V0 271 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 DNAJB2P25686 324 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 MESDQ14696 234 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 CLEC16AQ2KHT3 1053 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 FAM153CQ494X1 144 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 JADE1Q6IE81 842 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 DDX1Q92499 740 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 C18orf25Q96B23 403 aaPredicted RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 PPP1R10Q96QC0 940 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 CGRRF1Q99675 332 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 PI4K2AQ9BTU6 479 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 NRDE2Q9H7Z3 1164 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.53□□□□□ -0.24
PMEL-215ENST00000550464 KANSL3Q9P2N6 904 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 AMACRQ9UHK6 382 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 FAM153AQ9UHL3 310 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 MSRAQ9UJ68 235 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 RASAL2Q9UJF2 1139 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 PTPRSQ13332 1948 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 FAM170AA1A519 330 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 MYBL1P10243 752 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 KCNE1P15382 129 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 COMTP21964 271 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 TBXAS1P24557 533 aaPredicted RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 ACTN2P35609 894 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 HSPA9P38646 679 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 DR1Q01658 176 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 RAB30Q15771 203 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 SPOUT1Q5T280 376 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 LMBRD2Q68DH5 695 aaPredicted RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 EFCAB13Q8IY85 973 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 ZNF516Q92618 1163 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 ALG3Q92685 438 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 PAAF1Q9BRP4 392 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
PMEL-215ENST00000550464 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
PMEL-215ENST00000550464 CASTOR2A6NHX0 329 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 TTI1O43156 1089 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 ATMINO43313 823 aaPredicted RBP13.52□□□□□ -0.25
PMEL-215ENST00000550464 C4BPAP04003 597 aaKnown RBP13.52□□□□□ -0.25
PMEL-215ENST00000550464 AP3M2P53677 418 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 POU5F1Q01860 360 aaKnown RBP13.52□□□□□ -0.25
PMEL-215ENST00000550464 TAP1Q03518 808 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 DSC1Q08554 894 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 GRIK3Q13003 919 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 MTMR3Q13615 1198 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 SEC14L1Q92503 715 aa13.52□□□□□ -0.25
PMEL-215ENST00000550464 LRCH3Q96II8 777 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms