RNA–Protein interactions for RNA: ENST00000549709.5

CNOT2-219, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-219ENST00000549709 TCF7L1Q9HCS4 588 aa3.17□□□□□ -1.9
CNOT2-219ENST00000549709 ARHGEF3Q9NR81 526 aa3.17□□□□□ -1.9
CNOT2-219ENST00000549709 PDGFCQ9NRA1 345 aa3.17□□□□□ -1.9
CNOT2-219ENST00000549709 TUBA8Q9NY65 449 aaPredicted RBP3.17□□□□□ -1.9
CNOT2-219ENST00000549709 GOLGA6AQ9NYA3 693 aa3.17□□□□□ -1.9
CNOT2-219ENST00000549709 LUC7L2Q9Y383 392 aaKnown RBP3.17□□□□□ -1.9
CNOT2-219ENST00000549709 AFG3L2Q9Y4W6 797 aa3.17□□□□□ -1.9
CNOT2-219ENST00000549709 NOTCH4Q99466 2003 aa3.17□□□□□ -1.9
CNOT2-219ENST00000549709 CYSRT1A8MQ03 144 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 KCNU1A8MYU2 1149 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PRR23D1E9PI22 279 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 H3BNC9 293 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 SMIM22K7EJ46 135 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 FZD9O00144 591 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PRPF3O43395 683 aaKnown RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 HTRA2O43464 458 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 SGTAO43765 313 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 SNUPNO95149 360 aaKnown RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 MT-CO1P00395 513 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PRR23D2P0DMB1 279 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 CBSLP0DN79 551 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 TKTP29401 623 aaKnown RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 CBSP35520 551 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 CYP4F2P78329 520 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 DSC2Q02487 901 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PIGFQ07326 219 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 SNAPC2Q13487 334 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 HDAC1Q13547 482 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 HABP2Q14520 560 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 GFOD2Q3B7J2 385 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 Q4G0T1 1027 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PREPLQ4J6C6 727 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 RBM20Q5T481 1227 aaKnown RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PPP1R32Q7Z5V6 425 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 DGKHQ86XP1 1220 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 SMC5Q8IY18 1101 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 RBMXL3Q8N7X1 1067 aaKnown RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PSD4Q8NDX1 1056 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 C1orf162Q8NEQ5 155 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 ADAMTS15Q8TE58 950 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 TBC1D5Q92609 795 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 JADE3Q92613 823 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 SCAMP4Q969E2 229 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 RPS6KC1Q96S38 1066 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 PACSIN1Q9BY11 444 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 TPSD1Q9BZJ3 242 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 EBF3Q9H4W6 596 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 TDP1Q9NUW8 608 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 IP6K2Q9UHH9 426 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 ZBTB21Q9ULJ3 1066 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 NOB1Q9ULX3 412 aaKnown RBP3.16□□□□□ -1.9
CNOT2-219ENST00000549709 NR2E3Q9Y5X4 410 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 CNTNAP2Q9UHC6 1331 aa3.16□□□□□ -1.9
CNOT2-219ENST00000549709 LY6G6EA0A0G2JKS1 128 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 VSTM5A8MXK1 200 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 E5RJQ4 531 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 POLRMTO00411 1230 aaKnown RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PPM1DO15297 605 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PCDHGA12O60330 932 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 DNAJB5O75953 348 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 ANXA1P04083 346 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PF4V1P10720 104 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 C5AR1P21730 350 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 CCND1P24385 295 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 ARHGAP25P42331 645 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 RECQLP46063 649 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 AARS2Q5JTZ9 985 aaKnown RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 SLC4A10Q6U841 1118 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 DTX2Q86UW9 622 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PDSS2Q86YH6 399 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 CPA6Q8N4T0 437 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 IGFBPL1Q8WX77 278 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 COQ8BQ96D53 544 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 HMCESQ96FZ2 354 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 RITA1Q96K30 269 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 C5orf34Q96MH7 638 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 CAMK1GQ96NX5 476 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PPP1R10Q96QC0 940 aaKnown RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 NUP88Q99567 741 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 THAP7Q9BT49 309 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 ZNF700Q9H0M5 742 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 GPR35Q9HC97 309 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PRDM11Q9NQV5 511 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 CALCOCO1Q9P1Z2 691 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PNMA8BQ9ULN7 279 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 ANKRD6Q9Y2G4 727 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PCDHGA9Q9Y5G4 932 aaKnown RBP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PCDHGA8Q9Y5G5 932 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PCDHGA7Q9Y5G6 932 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PCDHGA6Q9Y5G7 932 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 PCDHGA3Q9Y5H0 932 aa3.15□□□□□ -1.91
CNOT2-219ENST00000549709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.15□□□□□ -1.91
CNOT2-219ENST00000549709 FCHO1O14526 889 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 TRIAP1O43715 76 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 NDUFS2O75306 463 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 IL6RP08887 468 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 CHRM3P20309 590 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 CYP2C19P33261 490 aa3.14□□□□□ -1.91
CNOT2-219ENST00000549709 NANOS2P60321 138 aaKnown RBP3.14□□□□□ -1.91
CNOT2-219ENST00000549709 RAB39AQ14964 217 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms