RNA–Protein interactions for RNA: ENST00000549709.5

CNOT2-219, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-219ENST00000549709 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
CNOT2-219ENST00000549709 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
CNOT2-219ENST00000549709 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
CNOT2-219ENST00000549709 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
CNOT2-219ENST00000549709 FOXD1Q16676 465 aa16.49■□□□□ 0.23
CNOT2-219ENST00000549709 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
CNOT2-219ENST00000549709 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
CNOT2-219ENST00000549709 ADRA2BP18089 450 aa15.32■□□□□ 0.04
CNOT2-219ENST00000549709 MSH5O43196 834 aa15.29■□□□□ 0.04
CNOT2-219ENST00000549709 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
CNOT2-219ENST00000549709 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
CNOT2-219ENST00000549709 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
CNOT2-219ENST00000549709 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
CNOT2-219ENST00000549709 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
CNOT2-219ENST00000549709 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
CNOT2-219ENST00000549709 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
CNOT2-219ENST00000549709 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
CNOT2-219ENST00000549709 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
CNOT2-219ENST00000549709 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
CNOT2-219ENST00000549709 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
CNOT2-219ENST00000549709 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
CNOT2-219ENST00000549709 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
CNOT2-219ENST00000549709 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
CNOT2-219ENST00000549709 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
CNOT2-219ENST00000549709 C1QBPQ07021 282 aaKnown RBP12.88□□□□□ -0.35
CNOT2-219ENST00000549709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■□□□ 11.9
CNOT2-219ENST00000549709 KCNA4P22459 653 aa12.64□□□□□ -0.39
CNOT2-219ENST00000549709 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
CNOT2-219ENST00000549709 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
CNOT2-219ENST00000549709 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-219ENST00000549709 DSG3P32926 999 aa12.31□□□□□ -0.44
CNOT2-219ENST00000549709 CAPN15O75808 1086 aa12.22□□□□□ -0.45
CNOT2-219ENST00000549709 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
CNOT2-219ENST00000549709 ABCB7O75027 752 aa12□□□□□ -0.49
CNOT2-219ENST00000549709 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
CNOT2-219ENST00000549709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
CNOT2-219ENST00000549709 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
CNOT2-219ENST00000549709 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-219ENST00000549709 APLP2Q06481 763 aa11.9□□□□□ -0.5
CNOT2-219ENST00000549709 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
CNOT2-219ENST00000549709 POTEHQ6S545 545 aa11.83□□□□□ -0.52
CNOT2-219ENST00000549709 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
CNOT2-219ENST00000549709 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
CNOT2-219ENST00000549709 POLA2Q14181 598 aa11.74□□□□□ -0.53
CNOT2-219ENST00000549709 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
CNOT2-219ENST00000549709 ZBTB22O15209 634 aa11.71□□□□□ -0.53
CNOT2-219ENST00000549709 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
CNOT2-219ENST00000549709 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
CNOT2-219ENST00000549709 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
CNOT2-219ENST00000549709 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CNOT2-219ENST00000549709 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
CNOT2-219ENST00000549709 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
CNOT2-219ENST00000549709 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
CNOT2-219ENST00000549709 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
CNOT2-219ENST00000549709 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
CNOT2-219ENST00000549709 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
CNOT2-219ENST00000549709 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
CNOT2-219ENST00000549709 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
CNOT2-219ENST00000549709 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
CNOT2-219ENST00000549709 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
CNOT2-219ENST00000549709 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
CNOT2-219ENST00000549709 FBLN2P98095 1184 aa11.05□□□□□ -0.64
CNOT2-219ENST00000549709 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
CNOT2-219ENST00000549709 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
CNOT2-219ENST00000549709 EVX2Q03828 476 aa11.01□□□□□ -0.65
CNOT2-219ENST00000549709 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
CNOT2-219ENST00000549709 HAX1O00165 279 aa10.92□□□□□ -0.66
CNOT2-219ENST00000549709 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
CNOT2-219ENST00000549709 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
CNOT2-219ENST00000549709 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
CNOT2-219ENST00000549709 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
CNOT2-219ENST00000549709 C19orf67A6NJJ6 358 aa10.79□□□□□ -0.68
CNOT2-219ENST00000549709 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
CNOT2-219ENST00000549709 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
CNOT2-219ENST00000549709 PRR29P0C7W0 189 aa10.68□□□□□ -0.7
CNOT2-219ENST00000549709 GABBR2O75899 941 aa10.63□□□□□ -0.71
CNOT2-219ENST00000549709 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
CNOT2-219ENST00000549709 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
CNOT2-219ENST00000549709 POTEIP0CG38 1075 aa10.52□□□□□ -0.73
CNOT2-219ENST00000549709 SPDYE4A6NLX3 237 aa10.5□□□□□ -0.73
CNOT2-219ENST00000549709 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
CNOT2-219ENST00000549709 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
CNOT2-219ENST00000549709 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
CNOT2-219ENST00000549709 PROM2Q8N271 834 aa10.38□□□□□ -0.75
CNOT2-219ENST00000549709 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
CNOT2-219ENST00000549709 LHX8Q68G74 356 aa10.36□□□□□ -0.75
CNOT2-219ENST00000549709 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
CNOT2-219ENST00000549709 CLCN6P51797 869 aa10.29□□□□□ -0.76
CNOT2-219ENST00000549709 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
CNOT2-219ENST00000549709 PHF12Q96QT6 1004 aa10.25□□□□□ -0.77
CNOT2-219ENST00000549709 PELP1Q8IZL8 1130 aaKnown RBP10.18□□□□□ -0.78
CNOT2-219ENST00000549709 DCBLD2Q96PD2 775 aa10.18□□□□□ -0.78
CNOT2-219ENST00000549709 POTEB2H3BUK9 544 aa10.17□□□□□ -0.78
CNOT2-219ENST00000549709 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
CNOT2-219ENST00000549709 MS4A3Q96HJ5 214 aa10.1□□□□□ -0.79
CNOT2-219ENST00000549709 CCDC61Q9Y6R9 512 aa10.09□□□□□ -0.79
CNOT2-219ENST00000549709 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
CNOT2-219ENST00000549709 PAK3O75914 559 aaPredicted RBP10.07□□□□□ -0.8
CNOT2-219ENST00000549709 ASTLQ6HA08 431 aaPredicted RBP10.06□□□□□ -0.8
CNOT2-219ENST00000549709 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms