RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 OXCT2Q9BYC2 517 aaPredicted RBP16.72■□□□□ 0.27
CLSTN3-216ENST00000545663 PCDHA12Q9UN75 941 aa16.72■□□□□ 0.27
CLSTN3-216ENST00000545663 TLX3O43711 291 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 SPATA31C1P0DKV0 1188 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 AARSP49588 968 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 GUCY2FP51841 1108 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 GRIK2Q13002 908 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 BYSLQ13895 437 aaKnown RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 ZNF268Q14587 947 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 ARMCX5Q6P1M9 558 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 PIK3AP1Q6ZUJ8 805 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 APBB1IPQ7Z5R6 666 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 RABEPKQ7Z6M1 372 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 TRIML1Q8N9V2 468 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 FAM181AQ8N9Y4 354 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 OXER1Q8TDS5 423 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 HSPA12BQ96MM6 686 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 TARS2Q9BW92 718 aaKnown RBP16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 DNMT3LQ9UJW3 386 aa16.71■□□□□ 0.27
CLSTN3-216ENST00000545663 CEP192Q8TEP8 1941 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 ZNF638Q14966 1978 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 K7ERI5 159 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 ABLIM1O14639 778 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 PPEF2O14830 753 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 CYP11B2P19099 503 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 MAOBP27338 520 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 GPR15P49685 360 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 EFNA5P52803 228 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 NR1H3Q13133 447 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 CCDC157Q569K6 752 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 BAHD1Q8TBE0 780 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 ZBTB45Q96K62 511 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 HSFX1Q9UBD0 423 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 ZMYM5Q9UJ78 669 aa16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 MAGED2Q9UNF1 606 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-216ENST00000545663 PLXND1Q9Y4D7 1925 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 PLK4O00444 970 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 PDIA3P30101 505 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 FAM160A1Q05DH4 1040 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 SDHAF4Q5VUM1 108 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 LRRTM3Q86VH5 581 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 RGL4Q8IZJ4 473 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 GALNT15Q8N3T1 639 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 LRRC15Q8TF66 581 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 ERLEC1Q96DZ1 483 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 TCHPQ9BT92 498 aa16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 MUC22E2RYF6 1773 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-216ENST00000545663 UBR5O95071 2799 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 IGHV1OR15-9A0A0B4J2B8 117 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 DTNBO60941 627 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 MED24O75448 989 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 TADA3O75528 432 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 HAPLN1P10915 354 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 GABRG2P18507 467 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 TXKP42681 527 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 KIR2DL1P43626 348 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 SEMG2Q02383 582 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 SCRN1Q12765 414 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 USP4Q13107 963 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 GALNT17Q6IS24 598 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 TAS1R3Q7RTX0 852 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 GPR155Q7Z3F1 870 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 CATSPER3Q86XQ3 398 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 TRIM22Q8IYM9 498 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 SEMA4CQ9C0C4 833 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 ZCWPW1Q9H0M4 648 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 CALCOCO1Q9P1Z2 691 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 DENND4CQ5VZ89 1909 aa16.68■□□□□ 0.26
CLSTN3-216ENST00000545663 MCF2P10911 925 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 TYMPP19971 482 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 PROZP22891 400 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 LRRC69Q6ZNQ3 347 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 RHBDD1Q8TEB9 315 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 CD93Q9NPY3 652 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 CYP8B1Q9UNU6 501 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 BTBD3Q9Y2F9 522 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 FNDC3AQ9Y2H6 1198 aaKnown RBP16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 COL6A6A6NMZ7 2263 aa16.67■□□□□ 0.26
CLSTN3-216ENST00000545663 TEX51A0A1B0GUA7 166 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 KAT7O95251 611 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 WISP1O95388 367 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms