RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SUMF1Q8NBK3 374 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 GOLGA5Q8TBA6 731 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 KBTBD7Q8WVZ9 684 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 MRPS31Q92665 395 aaKnown RBP16.75■□□□□ 0.27
VPS33A-206ENST00000542310 LRRC3BQ96PB8 259 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 SLC46A2Q9BY10 475 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 SPTBN4Q9H254 2564 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 DCHS1Q96JQ0 3298 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 SLC38A8A6NNN8 435 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-206ENST00000542310 TADA3O75528 432 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 PAPSS2O95340 614 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-206ENST00000542310 STAU1O95793 577 aaKnown RBP16.74■□□□□ 0.27
VPS33A-206ENST00000542310 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 SLFN14P0C7P3 912 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 TDGF1P13385 188 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 CYP2F1P24903 491 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 GPR15P49685 360 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 NRLP54845 237 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 DNM1Q05193 864 aaKnown RBP16.74■□□□□ 0.27
VPS33A-206ENST00000542310 PKP1Q13835 747 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 FOXD4L6Q3SYB3 417 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-206ENST00000542310 DGKKQ5KSL6 1271 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 SCARA3Q6AZY7 606 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 VSTM1Q6UX27 236 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 FOXD4L3Q6VB84 417 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-206ENST00000542310 MON1AQ86VX9 555 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 NELFCDQ8IXH7 590 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 TMEM174Q8WUU8 243 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 ATRIPQ8WXE1 791 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 RUBCNQ92622 972 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 SYT15Q9BQS2 421 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 BLZF1Q9H2G9 400 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 LMAN1LQ9HAT1 526 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 GTF3C4Q9UKN8 822 aa16.74■□□□□ 0.27
VPS33A-206ENST00000542310 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
VPS33A-206ENST00000542310 TACC1O75410 805 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 MYL1P05976 194 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
VPS33A-206ENST00000542310 TNNI1P19237 187 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 CYP2J2P51589 502 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 CUL4BQ13620 913 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 KNOP1Q1ED39 458 aaKnown RBP16.73■□□□□ 0.27
VPS33A-206ENST00000542310 ITPRIPL2Q3MIP1 535 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 SYNPOQ8N3V7 929 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 SPEM1Q8N4L4 309 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 MAB21L3Q8N8X9 362 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 SPATA17Q96L03 361 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 GTSE1Q9NYZ3 720 aa16.73■□□□□ 0.27
VPS33A-206ENST00000542310 MAGED2Q9UNF1 606 aaPredicted RBP16.73■□□□□ 0.27
VPS33A-206ENST00000542310 FRYLO94915 3013 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 CLIC2O15247 247 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 PFKLP17858 780 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 CASP1P29466 404 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 AFMP43652 599 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 SOX9P48436 509 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 CDR1P51861 262 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 DDR2Q16832 855 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 TXNDC11Q6PKC3 985 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 FSIP1Q8NA03 581 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 USP13Q92995 863 aaPredicted RBP16.72■□□□□ 0.27
VPS33A-206ENST00000542310 MYLPFQ96A32 169 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 ZFYVE19Q96K21 471 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 FAM83CQ9BQN1 747 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 EXOC1Q9NV70 894 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 EHD2Q9NZN4 543 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 MAGEC2Q9UBF1 373 aaPredicted RBP16.72■□□□□ 0.27
VPS33A-206ENST00000542310 SMG5Q9UPR3 1016 aaKnown RBP16.72■□□□□ 0.27
VPS33A-206ENST00000542310 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
VPS33A-206ENST00000542310 DMXL1Q9Y485 3027 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 TRIM66O15016 1216 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 HCRTO43612 131 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 KLRC4O43908 158 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 TCF3P15923 654 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 ATICP31939 592 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 PDE6CP51160 858 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 AP3M2P53677 418 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 PSMC1P62191 440 aaKnown RBP16.71■□□□□ 0.27
VPS33A-206ENST00000542310 TNNC1P63316 161 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 FOXK2Q01167 660 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 FAM160A1Q05DH4 1040 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 USP4Q13107 963 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 PSMD2Q13200 908 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 CCINQ13939 588 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 CCDC142Q17RM4 750 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 SDHAF4Q5VUM1 108 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 TXNDC8Q6A555 127 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 SLC9A9Q8IVB4 645 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 SECISBP2LQ93073 1101 aaKnown RBP16.71■□□□□ 0.27
VPS33A-206ENST00000542310 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.27
VPS33A-206ENST00000542310 MMS19Q96T76 1030 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
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