RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CYP11B1P15538 503 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 GNA15P30679 374 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 PRKCIP41743 596 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 GLUD2P49448 558 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 GSDMDP57764 484 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ERVFC1P60507 584 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 DSG1Q02413 1049 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 PTK2Q05397 1052 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 KLHL30Q0D2K2 578 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 CAMK1Q14012 370 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 MEA1Q16626 185 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 CTXN3Q4LDR2 81 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 MDH1BQ5I0G3 518 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 KIAA1841Q6NSI8 718 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 LRRC8AQ8IWT6 810 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 TTC39CQ8N584 583 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 B3GALNT2Q8NCR0 500 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 SPATA18Q8TC71 538 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 POF1BQ8WVV4 589 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ZNF606Q8WXB4 792 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ARNTL2Q8WYA1 636 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 PKMYT1Q99640 499 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 CLSTN3Q9BQT9 956 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 SYT11Q9BT88 431 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ZBP1Q9H171 429 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 KCNF1Q9H3M0 494 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 FAM124BQ9H5Z6 455 aaPredicted RBP9.93□□□□□ -0.82
DDX55-208ENST00000541259 FAM49BQ9NUQ9 324 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 NOCTQ9UK39 431 aaKnown RBP9.93□□□□□ -0.82
DDX55-208ENST00000541259 GTF3C4Q9UKN8 822 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 CDH9Q9ULB4 789 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 RWDD3Q9Y3V2 267 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 PCDHGC5Q9Y5F6 944 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 DOCK6Q96HP0 2047 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 TRANK1O15050 2925 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PATJQ8NI35 1801 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 H3BNC9 293 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 H7C4K7 107 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 RFXAPO00287 272 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 CLDN5O00501 218 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 LILRB3O75022 631 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 MMEP08473 750 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 CTSAP10619 480 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 VDRP11473 427 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 CCDC130P13994 396 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PCSK1P29120 753 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 IRS1P35568 1242 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 EIF4A3P38919 411 aaKnown RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 ARPP19P56211 112 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 BPIFB4P59827 614 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 SMAD3P84022 425 aaKnown RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 FMO1Q01740 532 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 GPM6BQ13491 265 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 MTF1Q14872 753 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PTPN14Q15678 1187 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PSMD5Q16401 504 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 SLC39A12Q504Y0 691 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 SGO2Q562F6 1265 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 TDRD12Q587J7 1177 aaKnown RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 PPP1R26Q5T8A7 1209 aaPredicted RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 ZNF280DQ6N043 979 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 DENND1BQ6P3S1 775 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 FAM171BQ6P995 826 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PAQR9Q6ZVX9 377 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 ANKS3Q6ZW76 656 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 DNAAF5Q86Y56 855 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PIK3R5Q8WYR1 880 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 TIFAQ96CG3 184 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 CYFIP2Q96F07 1278 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 TNIP3Q96KP6 325 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 SAMD11Q96NU1 681 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 PCDHB18PQ96TA0 734 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 BAG1Q99933 345 aaPredicted RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 AGPAT1Q99943 283 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 B3GNT5Q9BYG0 378 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 RHOBTB2Q9BYZ6 727 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 ZCWPW1Q9H0M4 648 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 SLC28A3Q9HAS3 691 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
DDX55-208ENST00000541259 MTRRQ9UBK8 725 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 LZTS1Q9Y250 596 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 CDH23Q9H251 3354 aa9.92□□□□□ -0.82
DDX55-208ENST00000541259 OR6C75A6NL08 312 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 HIDE1A8MVS5 230 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 O00370 1275 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 DDX3XO00571 662 aaKnown RBP eCLIP9.91□□□□□ -0.82
DDX55-208ENST00000541259 MICAL2O94851 1124 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 VNN2O95498 520 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CXCL14O95715 111 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 URODP06132 367 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 TNFAIP3P21580 790 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms