RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 PYDC1Q8WXC3 89 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 OXNAD1Q96HP4 312 aaPredicted RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 SLC24A2Q9UI40 661 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 FEM1BQ9UK73 627 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 WASF2Q9Y6W5 498 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 MROH7Q68CQ1 1323 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 KBTBD13C9JR72 458 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 CYP1B1Q16678 543 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 C7orf31Q8N865 590 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 HELQQ8TDG4 1101 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 ZNF606Q8WXB4 792 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 PIH1D1Q9NWS0 290 aaKnown RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 NOP56O00567 594 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 CFHP08603 1231 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 TCF4P15884 667 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 NRLP54845 237 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 BCAR1P56945 870 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 SESN2P58004 480 aaPredicted RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 IRGCQ6NXR0 463 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 C4orf50Q6ZRC1 276 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 CADM1Q9BY67 442 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 PIDD1Q9HB75 910 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 DDX56Q9NY93 547 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 M0QYV0 167 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 STK10O94804 968 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 SP100P23497 879 aaPredicted RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 DSG3P32926 999 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 MMP14P50281 582 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 GAD2Q05329 585 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 ZNF184Q99676 751 aaPredicted RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 KLC2Q9H0B6 622 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 RNF146Q9NTX7 359 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 NEMP1O14524 444 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 AVILO75366 819 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 VIL1P09327 827 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 MYBPC2Q14324 1141 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 PSPC1Q8WXF1 523 aaKnown RBP13.55□□□□□ -0.24
MSH6-210ENST00000540021 MKL1Q969V6 931 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 SCYL1Q96KG9 808 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 ANLNQ9NQW6 1124 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 ACTL7BQ9Y614 415 aa13.55□□□□□ -0.24
MSH6-210ENST00000540021 GSC2O15499 205 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 RGS7P49802 495 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 CDK16Q00536 496 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 PRKCEQ02156 737 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 SLC15A2Q16348 729 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 ASAP3Q8TDY4 903 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 TRIM56Q9BRZ2 755 aaKnown RBP13.54□□□□□ -0.24
MSH6-210ENST00000540021 NMUR2Q9GZQ4 415 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 ABL2P42684 1182 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 GPC3P51654 580 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
MSH6-210ENST00000540021 MAP7D1Q3KQU3 841 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 ACSBG2Q5FVE4 666 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 CDKL2Q92772 493 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 SRPK1Q96SB4 655 aaKnown RBP13.54□□□□□ -0.24
MSH6-210ENST00000540021 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 CCDC78A2IDD5 438 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 C2CD2LO14523 706 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 DGKIO75912 1065 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 FAM155BO75949 473 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 ASNSP08243 561 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
MSH6-210ENST00000540021 CCND2P30279 289 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 CHRNA5P30532 468 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 SFNP31947 248 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 DYNC1I2Q13409 638 aaKnown RBP13.54□□□□□ -0.24
MSH6-210ENST00000540021 ZNF677Q86XU0 584 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 KATNAL2Q8IYT4 538 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 ICA1LQ8NDH6 482 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 LRGUKQ96M69 825 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 PCDH9Q9HC56 1237 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 RHBDL2Q9NX52 303 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 ETAA1Q9NY74 926 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
MSH6-210ENST00000540021 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 EXTL3O43909 919 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 ADCY3O60266 1144 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 HSPA4LO95757 839 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 OSBPP22059 807 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 TCHHL1Q5QJ38 904 aaPredicted RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms