RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MAGEB18Q96M61 343 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 ZNF570Q96NI8 536 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 SLC9A7Q96T83 725 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 LRMDAQ9H2I8 198 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 NKX2-4Q9H2Z4 354 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 AZI2Q9H6S1 392 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 LRRC19Q9H756 370 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 RAVER2Q9HCJ3 691 aaKnown RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 TYW1Q9NV66 732 aaKnown RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 ADAM22Q9P0K1 906 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 PCDHA12Q9UN75 941 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 AGAP1Q9UPQ3 857 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 YBX2Q9Y2T7 364 aaKnown RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 TRANK1O15050 2925 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 PRRC2BQ5JSZ5 2229 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 UBE4BO95155 1302 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 BAZ2AQ9UIF9 1905 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 P4HA2O15460 535 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 KPNA6O60684 536 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SNUPNO95149 360 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 UNC5CO95185 931 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SHBGP04278 402 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 GSTA2P09210 222 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 NEFHP12036 1026 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 GZMAP12544 262 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ACTN1P12814 892 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ACADSP16219 412 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SMPD1P17405 629 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SLC9A1P19634 815 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ATP6V1C1P21283 382 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 MUTP22033 750 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 NR2F2P24468 414 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ALDH3A1P30838 453 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 YARSP54577 528 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SLC12A3P55017 1021 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 PLTPP55058 493 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 IFI35P80217 286 aaPredicted RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 PTPN11Q06124 597 aaPredicted RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 DUSP28Q4G0W2 176 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 BRDTQ58F21 947 aaPredicted RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ANKRD20A2Q5SQ80 823 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ANKRD20A1Q5TYW2 823 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ANKRD20A3Q5VUR7 823 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SLFN13Q68D06 897 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 KCNK18Q7Z418 384 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SESTD1Q86VW0 696 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SYT2Q8N9I0 419 aaPredicted RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 BBOF1Q8ND07 529 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 OLIG1Q8TAK6 271 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 ERMNQ8TAM6 284 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 DHX38Q92620 1227 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 HAS1Q92839 578 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 AGBL1Q96MI9 1066 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 PRMT1Q99873 361 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SELENOSQ9BQE4 189 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 CCDC77Q9BR77 488 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 MAF1Q9H063 256 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 DPH5Q9H2P9 285 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SEMA4AQ9H3S1 761 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 TLE6Q9H808 572 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 RNPEPL1Q9HAU8 725 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 SAR1AQ9NR31 198 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 OLFML3Q9NRN5 406 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 RNF146Q9NTX7 359 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 LMCD1Q9NZU5 365 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 DDX25Q9UHL0 483 aaKnown RBP8.1□□□□□ -1.11
CCDC60-204ENST00000539847 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
CCDC60-204ENST00000539847 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 LRRD1A4D1F6 860 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 NDC80O14777 642 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 MAPK13O15264 365 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 DYNC1LI2O43237 492 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 B4GALT4O60513 344 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ATP2C2O75185 946 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 BAIAP3O94812 1187 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 PARNO95453 639 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ADH1AP07327 375 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 TNFAIP3P21580 790 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 GNA15P30679 374 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 PSMC2P35998 433 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 COILP38432 576 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 CPT1AP50416 773 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 PEX5P50542 639 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 PSMA6P60900 246 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 KCNJ2P63252 427 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 BEX3Q00994 111 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ROR2Q01974 943 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 CNTN2Q02246 1040 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ARID5AQ03989 594 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 STRN3Q13033 797 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 GIT2Q14161 759 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 STAT4Q14765 748 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms