RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CACNA1AO00555 2505 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 PRR5-ARHGAP8B1AHC4 643 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 EIF3DO15371 548 aaKnown RBP eCLIP10.38□□□□□ -0.758e-8■□□□□ 9.1
CHD4-207ENST00000537634 PPP6R2O75170 966 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 NOL4O94818 638 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 YEATS4O95619 227 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 ARHGAP8P85298 464 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 AMPD2Q01433 879 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 GRSF1Q12849 480 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD4-207ENST00000537634 RUNX3Q13761 415 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 SIM2Q14190 667 aaPredicted RBP10.38□□□□□ -0.75
CHD4-207ENST00000537634 E2F4Q16254 413 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 DUOXA2Q1HG44 320 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 SOWAHAQ2M3V2 549 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 CFAP221Q4G0U5 840 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 FAM26FQ5R3K3 315 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 HEATR6Q6AI08 1181 aaKnown RBP10.38□□□□□ -0.75
CHD4-207ENST00000537634 C4orf50Q6ZRC1 276 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 DPH6Q7L8W6 267 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.38□□□□□ -0.75
CHD4-207ENST00000537634 LONP2Q86WA8 852 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 OSTM1Q86WC4 334 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 CBWD2Q8IUF1 395 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 WDR49Q8IV35 697 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 FSIP1Q8NA03 581 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 IQUBQ8NA54 791 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 GLIS3Q8NEA6 775 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 OR5B17Q8NGF7 314 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 HPS3Q969F9 1004 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
CHD4-207ENST00000537634 FUBP3Q96I24 572 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD4-207ENST00000537634 PKMYT1Q99640 499 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 FAM83CQ9BQN1 747 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 TRIM9Q9C026 710 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 KIAA1586Q9HCI6 787 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 KBTBD4Q9NVX7 518 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 HSPBP1Q9NZL4 362 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
CHD4-207ENST00000537634 CDV3Q9UKY7 258 aaKnown RBP10.38□□□□□ -0.75
CHD4-207ENST00000537634 UBE4BO95155 1302 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 TRAV19A0A0A6YYK7 116 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 MED19A0JLT2 244 aaPredicted RBP10.37□□□□□ -0.75
CHD4-207ENST00000537634 K7ESF4 209 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 GABRDO14764 452 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 HCRTO43612 131 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 CUTAO60888 179 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 TADA3O75528 432 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 CKMP06732 381 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 CNR2P34972 360 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 PSMC1P62191 440 aaKnown RBP10.37□□□□□ -0.75
CHD4-207ENST00000537634 DMWDQ09019 674 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 SPEM2Q0P670 501 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 ZNF268Q14587 947 aaPredicted RBP10.37□□□□□ -0.75
CHD4-207ENST00000537634 MTF1Q14872 753 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 PDGFRLQ15198 375 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 MAPRE1Q15691 268 aaKnown RBP10.37□□□□□ -0.75
CHD4-207ENST00000537634 CCDC142Q17RM4 750 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 TMEM196Q5HYL7 178 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 SCARA3Q6AZY7 606 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 TRIM68Q6AZZ1 485 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 CEP68Q76N32 757 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 CPA6Q8N4T0 437 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 TTC16Q8NEE8 873 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 EXOC4Q96A65 974 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 MYRFLQ96LU7 910 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 FNBP1Q96RU3 617 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 HPS4Q9NQG7 708 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 CDH9Q9ULB4 789 aa10.37□□□□□ -0.75
CHD4-207ENST00000537634 HELZP42694 1942 aaKnown RBP10.37□□□□□ -0.75
CHD4-207ENST00000537634 OTOL1A6NHN0 477 aaPredicted RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 TRDMT1O14717 391 aaKnown RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 HRO43593 1189 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 LRP3O75074 770 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 ATG13O75143 517 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 ATP2C2O75185 946 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 RETP07949 1114 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 DLATP10515 647 aaKnown RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 ARSAP15289 507 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 TNNI1P19237 187 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 ANXA13P27216 316 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 HOXA6P31267 233 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 HOXD13P35453 343 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 MAGEA11P43364 429 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 CYP2J2P51589 502 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 CYP27A1Q02318 531 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 SRSF5Q13243 272 aaKnown RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 KCNB1Q14721 858 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 SNRNP35Q16560 246 aaKnown RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 FSTL4Q6MZW2 842 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms