RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RFC1P35251 1148 aaPredicted RBP14.12□□□□□ -0.15
BEST1-208ENST00000534553 PCK1P35558 622 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 SCNN1AP37088 669 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 GGCXP38435 758 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 DRICH1Q6PGQ1 229 aaPredicted RBP14.12□□□□□ -0.15
BEST1-208ENST00000534553 LRIG3Q6UXM1 1119 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 ZDHHC14Q8IZN3 488 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 IQCKQ8N0W5 287 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 OR6B3Q8NGW1 331 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 ATL2Q8NHH9 583 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 C18orf25Q96B23 403 aaPredicted RBP14.12□□□□□ -0.15
BEST1-208ENST00000534553 SH3GL2Q99962 352 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 FAM105AQ9NUU6 356 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 SRRDQ9UH36 339 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 ST3GAL5Q9UNP4 418 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 SQORQ9Y6N5 450 aa14.12□□□□□ -0.15
BEST1-208ENST00000534553 PDCD11Q14690 1871 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 F8VP50 259 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 GOLGA8SH3BPF8 625 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 SYF2O95926 243 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 KRT1P04264 644 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 FAM153BP0C7A2 387 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 SKIP12755 728 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 BCAT1P54687 386 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 CAV1Q03135 178 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 MGAT3Q09327 533 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 CALCOCO2Q13137 446 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PPP1R7Q15435 360 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 TERF2Q15554 542 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 SOWAHAQ2M3V2 549 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 GOLGA7BQ2TAP0 167 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 DEFB115Q30KQ5 88 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 FAM153CQ494X1 144 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PKDCCQ504Y2 493 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 TFDP3Q5H9I0 405 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 ZFYVE27Q5T4F4 411 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 CCSAPQ6IQ19 270 aaPredicted RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 TTC27Q6P3X3 843 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PXYLP1Q8TE99 480 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PPP1R13LQ8WUF5 828 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 CAPNS2Q96L46 248 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 SLITRK1Q96PX8 696 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PPP1R10Q96QC0 940 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 MRPL45Q9BRJ2 306 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 TRIM51Q9BSJ1 452 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 DCLK3Q9C098 648 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 DPH5Q9H2P9 285 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 SNX25Q9H3E2 840 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PLEKHA4Q9H4M7 779 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 FAM153AQ9UHL3 310 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 TCRBV7S2A1N4TA0A589 114 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 AGPSO00116 658 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 POLR3GO15318 223 aaPredicted RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 RNF40O75150 1001 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 WARSP23381 471 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 GNL1P36915 607 aaPredicted RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 ZNF143P52747 638 aaPredicted RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 OGDHQ02218 1023 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 PTK7Q13308 1070 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 ORC1Q13415 861 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 ARHGEF6Q15052 776 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 KCNA10Q16322 511 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 FAM102AQ5T9C2 384 aaPredicted RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 ARCQ7LC44 396 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 TMEM110Q86TL2 294 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 TSEN2Q8NCE0 465 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 EXOC4Q96A65 974 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 CNPY3Q9BT09 278 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 SLC4A5Q9BY07 1137 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 UBN1Q9NPG3 1134 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 METTL5Q9NRN9 209 aaKnown RBP14.11□□□□□ -0.15
BEST1-208ENST00000534553 WHRNQ9P202 907 aa14.11□□□□□ -0.15
BEST1-208ENST00000534553 MOXD2PA6NHM9 499 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 PPEF2O14830 753 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 LRCH4O75427 683 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 ACADSBP45954 432 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 SLC8A3P57103 927 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 LILRA4P59901 499 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 BST2Q10589 180 aaKnown RBP14.1□□□□□ -0.15
BEST1-208ENST00000534553 PTK6Q13882 451 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 TRADDQ15628 312 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 PTGISQ16647 500 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 PPP1R26Q5T8A7 1209 aaPredicted RBP14.1□□□□□ -0.15
BEST1-208ENST00000534553 TMC3Q7Z5M5 1100 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 ACOT1Q86TX2 421 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 DDX42Q86XP3 938 aaKnown RBP eCLIP14.1□□□□□ -0.15
BEST1-208ENST00000534553 CCDC89Q8N998 374 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 ANKRD52Q8NB46 1076 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 TTC13Q8NBP0 860 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 ST7Q9NRC1 585 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 ZDHHC18Q9NUE0 388 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 PSD3Q9NYI0 1048 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 KLK14Q9P0G3 267 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 VPS18Q9P253 973 aa14.1□□□□□ -0.15
BEST1-208ENST00000534553 DDX20Q9UHI6 824 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms