RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 FAM107BQ9H098 131 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 PCDH9Q9HC56 1237 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ADAM22Q9P0K1 906 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 RASAL2Q9UJF2 1139 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 K7ERI5 159 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 TRAFD1O14545 582 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 RASGRF2O14827 1237 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 KDELR1P24390 212 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 CCDC38Q502W7 563 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 RIBC1Q8N443 379 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 C10orf82Q8WW14 230 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 COPS5Q92905 334 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 MAGEB18Q96M61 343 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ACTR5Q9H9F9 607 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 PDGFCQ9NRA1 345 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 HOMER3Q9NSC5 361 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 SHOC2Q9UQ13 582 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 COL4A6Q14031 1691 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 COL1A2P08123 1366 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 GPR32O75388 356 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 BANF1O75531 89 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 IFT88Q13099 833 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SNX1Q13596 522 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SGSM1Q2NKQ1 1148 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 IZUMO3Q5VZ72 239 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 ARCQ7LC44 396 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 PLD5Q8N7P1 536 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 AFG1LQ8WV93 481 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 TRAPPC12Q8WVT3 735 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SEPT1Q8WYJ6 367 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SLC7A6OSQ96CW6 309 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MCEEQ96PE7 176 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 PHF12Q96QT6 1004 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SMYD3Q9H7B4 428 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 EBF2Q9HAK2 575 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 KIF9Q9HAQ2 790 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 KCNG1Q9UIX4 513 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 ADM5C9JUS6 153 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SPOPO43791 374 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 TRUB2O95900 331 aaKnown RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 NSFP46459 744 aaKnown RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 NRLP54845 237 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 EFTUD2Q15029 972 aaKnown RBP eCLIP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SLC1A5Q15758 541 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 P3H1Q32P28 736 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 CYB5D1Q6P9G0 228 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 CCDC105Q8IYK2 499 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 BANPQ8N9N5 519 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 ZSCAN18Q8TBC5 510 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MRPL4Q9BYD3 311 aaKnown RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 KLHL11Q9NVR0 708 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 METRNQ9UJH8 293 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MYO16Q9Y6X6 1858 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 PCK1P35558 622 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MAGEA4P43358 317 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 RAP1GAPP47736 663 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 TAP1Q03518 808 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SLC18A2Q05940 514 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 EIF4EBP2Q13542 120 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 PIGHQ14442 188 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MXD4Q14582 209 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 TTC31Q49AM3 519 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 FAM91A1Q658Y4 838 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 UNC45BQ8IWX7 931 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 OR6Y1Q8NGX8 325 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MAIP1Q8WWC4 291 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 SPOCK2Q92563 424 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 NT5C3BQ969T7 300 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 HEMGNQ9BXL5 484 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 FRMD8P1Q9BZ68 369 aaPredicted RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 IMPG2Q9BZV3 1241 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 MRPL47Q9HD33 250 aaKnown RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 TPX2Q9ULW0 747 aaKnown RBP7.53□□□□□ -1.2
RNPC3-209ENST00000533834 NEU3Q9UQ49 428 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 PCDHB4Q9Y5E5 795 aa7.53□□□□□ -1.2
RNPC3-209ENST00000533834 A0A1W2PPM1 405 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 TSPAN1O60635 241 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 ATP2C2O75185 946 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 SNAI1O95863 264 aaPredicted RBP7.52□□□□□ -1.21
RNPC3-209ENST00000533834 PRKCBP05771 671 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 TSHRP16473 764 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 GM2AP17900 193 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 RPL22P35268 128 aaKnown RBP7.52□□□□□ -1.21
RNPC3-209ENST00000533834 CCNFP41002 786 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 SKIV2L2P42285 1042 aaKnown RBP7.52□□□□□ -1.21
RNPC3-209ENST00000533834 SLC26A2P50443 739 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 DPYSL3Q14195 570 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 NEDD9Q14511 834 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 PREPLQ4J6C6 727 aaPredicted RBP7.52□□□□□ -1.21
RNPC3-209ENST00000533834 CYP4A22Q5TCH4 519 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 ICE2Q659A1 982 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 JADE1Q6IE81 842 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 BHLHA9Q7RTU4 235 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 CROCCP2Q86T23 111 aa7.52□□□□□ -1.21
RNPC3-209ENST00000533834 CAND1Q86VP6 1230 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms