RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 IL1BP01584 269 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 NR3C2P08235 984 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 DHRS4L1P0CG22 281 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 CHRNA5P30532 468 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 PLCB3Q01970 1234 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 GAD2Q05329 585 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 TAZQ16635 292 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 ZBTB41Q5SVQ8 909 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 CIAPIN1Q6FI81 312 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 APLFQ8IW19 511 aaPredicted RBP17.45■□□□□ 0.38
CTSB-228ENST00000533455 ACSF2Q96CM8 615 aaPredicted RBP17.45■□□□□ 0.38
CTSB-228ENST00000533455 BTBD10Q9BSF8 475 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 CADM1Q9BY67 442 aaKnown RBP17.45■□□□□ 0.38
CTSB-228ENST00000533455 TRIM55Q9BYV6 548 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 MANSC1Q9H8J5 431 aa17.45■□□□□ 0.38
CTSB-228ENST00000533455 TGDSO95455 350 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 NAMPTP43490 491 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 OTUD4Q01804 1114 aaKnown RBP17.44■□□□□ 0.38
CTSB-228ENST00000533455 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 TRIM68Q6AZZ1 485 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 SMYD5Q6GMV2 418 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 DNAJC9Q8WXX5 260 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 SKA1Q96BD8 255 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 ZBTB45Q96K62 511 aaPredicted RBP17.44■□□□□ 0.38
CTSB-228ENST00000533455 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 JPH1Q9HDC5 661 aaPredicted RBP17.44■□□□□ 0.38
CTSB-228ENST00000533455 SLC9A2Q9UBY0 812 aa17.44■□□□□ 0.38
CTSB-228ENST00000533455 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
CTSB-228ENST00000533455 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
CTSB-228ENST00000533455 ASS1P00966 412 aaKnown RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 RPL22P35268 128 aaKnown RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 PCK1P35558 622 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 AP3M2P53677 418 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 GDF10P55107 478 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 SLC25A11Q02978 314 aaKnown RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 BAATQ14032 418 aaPredicted RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 MTERF2Q49AM1 385 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 C3orf62Q6ZUJ4 267 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 RHPN2Q8IUC4 686 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 FBXO36Q8NEA4 188 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 ACTL9Q8TC94 416 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 IMPG2Q9BZV3 1241 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 ARL8BQ9NVJ2 186 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 SLC17A7Q9P2U7 560 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 STOML1Q9UBI4 398 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 PCDHGC3Q9UN70 934 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 TELO2Q9Y4R8 837 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 KIF3CO14782 793 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 RGS20O76081 388 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 BRD2P25440 801 aaKnown RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 NEK3P51956 506 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 ACTR2P61160 394 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 CDK16Q00536 496 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 LBRQ14739 615 aaKnown RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 SGSM1Q2NKQ1 1148 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 FAM91A1Q658Y4 838 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 RFWD3Q6PCD5 774 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 NSL1Q96IY1 281 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 ZNF333Q96JL9 665 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 TSSK1BQ9BXA7 367 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 PORCNQ9H237 461 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 DCTN4Q9UJW0 460 aa17.43■□□□□ 0.38
CTSB-228ENST00000533455 MTO1Q9Y2Z2 717 aaKnown RBP17.43■□□□□ 0.38
CTSB-228ENST00000533455 WDR91A4D1P6 747 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 H0Y3Z8 333 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 RAD17O75943 681 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 TMEM63AO94886 807 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 EIF4BP23588 611 aaKnown RBP17.42■□□□□ 0.38
CTSB-228ENST00000533455 ETV4P43268 484 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 ARFIP2P53365 341 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 TGFB2P61812 414 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 OVGP1Q12889 678 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 DGKZQ13574 1117 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 KRT72Q14CN4 511 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 DEPTORQ8TB45 409 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 PTPRN2Q92932 1015 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 HEY2Q9UBP5 337 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 K7ERI5 159 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 GSC2O15499 205 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 KRT7P08729 469 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 SUPT20HL2P0C7V6 817 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 ARL2P36404 184 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 VHLP40337 213 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 SLC18A2Q05940 514 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 GRM1Q13255 1194 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 PRKD1Q15139 912 aaPredicted RBP17.42■□□□□ 0.38
CTSB-228ENST00000533455 SUPT20HL1Q3ZLR7 823 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 KHDC1Q4VXA5 237 aaKnown RBP17.42■□□□□ 0.38
CTSB-228ENST00000533455 NAIF1Q69YI7 327 aaPredicted RBP17.42■□□□□ 0.38
CTSB-228ENST00000533455 GPAT2Q6NUI2 795 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 BRSK2Q8IWQ3 736 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 PALM2Q8IXS6 379 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 THNSL1Q8IYQ7 743 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 APOPT1Q96IL0 206 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 ZBED3Q96IU2 234 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms