RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PJA2O43164 708 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TRMUO75648 421 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 FOSP01100 380 aaPredicted RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 NUDT17P0C025 328 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 SMARCA1P28370 1054 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ADCYAP1R1P41586 468 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TRPC1P48995 793 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TUFMP49411 452 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TUBP50607 506 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 PDK3Q15120 406 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 OASLQ15646 514 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CEP55Q53EZ4 464 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ZNF280DQ6N043 979 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 STXBP4Q6ZWJ1 553 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 GPBP1Q86WP2 473 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 SFR1Q86XK3 245 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 OR6Y1Q8NGX8 325 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ANKRD36BP1Q96IX9 119 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ZNF317Q96PQ6 595 aaPredicted RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TSSK1BQ9BXA7 367 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 WWP1Q9H0M0 922 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 DMTF1Q9Y222 760 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 DDX3XO00571 662 aaKnown RBP eCLIP7.09□□□□□ -1.271e-7■■■□□ 17.3
TGFBR3-209ENST00000532540 KPNA4O00629 521 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PHF2O75151 1096 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 DEAF1O75398 565 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 DAB1O75553 588 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 DDHD2O94830 711 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CCDC159P0C7I6 412 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 SERPINB1P30740 379 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 NPEPPSP55786 919 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 STK4Q13043 487 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 MAPK7Q13164 816 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PPP2R5CQ13362 524 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CCL14Q16627 93 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 SLC45A4Q5BKX6 768 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CMPK2Q5EBM0 449 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ATG16L1Q676U5 607 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PLA2G4FQ68DD2 849 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CRLF3Q8IUI8 442 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 SYTL5Q8TDW5 730 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TLCD1Q96CP7 247 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 AGXT2Q9BYV1 514 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CAAP1Q9H8G2 361 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TRPC7Q9HCX4 862 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 FBXO40Q9UH90 709 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 USP20Q9Y2K6 914 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 UBR3Q6ZT12 1888 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 NPHP3-ACAD11A0A0J9YXS1 232 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 HTR3EA5X5Y0 456 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CES2O00748 559 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 WNT7AO00755 349 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ZBTB39O15060 712 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 EXOC3O60645 756 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 IFNB1P01574 187 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ITGA4P13612 1032 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 EEF1B2P24534 225 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 FCGRTP55899 365 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TMPRSS15P98073 1019 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ARHGAP44Q17R89 818 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 KHDC1Q4VXA5 237 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 MDH1BQ5I0G3 518 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PLEKHA7Q6IQ23 1121 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 GPR141Q7Z602 305 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 IQCF2Q8IXL9 164 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 C4orf33Q8N1A6 199 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 CCDC89Q8N998 374 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TTC25Q96NG3 672 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PRPF18Q99633 342 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 DCUN1D5Q9BTE7 237 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 SAYSD1Q9NPB0 183 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 KCNH7Q9NS40 1196 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 APPL1Q9UKG1 709 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 SYCE1LA8MT33 242 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 BOLA2-SMG1P6H3BVE0 249 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 INO80B-WBP1J3KQ70 363 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 INHBAP08476 426 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 FAM58BPP0C7Q3 252 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ANPEPP15144 967 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 HALP42357 657 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 HSPA13P48723 471 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 HDAC4P56524 1084 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 SOX10P56693 466 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TUBA1BP68363 451 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 MFSD14CQ5VZR4 134 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 KAZNQ674X7 775 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 FAAH2Q6GMR7 532 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PACS1Q6VY07 963 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TUBA1AQ71U36 451 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ZNF572Q7Z3I7 529 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TMPRSS6Q8IU80 811 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 PIAS4Q8N2W9 510 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 INPP4AQ96PE3 977 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 INO80BQ9C086 356 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 TRNAU1APQ9NX07 287 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 RABL2AQ9UBK7 228 aaPredicted RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 ZNF510Q9Y2H8 683 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms