RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 RRN3P2A6NIE6 340 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 F8W810 466 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 PSTPIP1O43586 416 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 HBP1O60381 514 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 ALDH1A2O94788 518 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 KLK7P49862 253 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 NCKAP1LP55160 1127 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 ALDH6A1Q02252 535 aaKnown RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 MROH9Q5TGP6 573 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 LRRC71Q8N4P6 559 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 ECSITQ9BQ95 431 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 FRMD8P1Q9BZ68 369 aaPredicted RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 CSTF3Q12996 717 aaKnown RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 TTLL9Q3SXZ7 439 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 OLFML2BQ68BL8 750 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 FAM180AQ6UWF9 173 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 RMND5AQ9H871 391 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.46□□□□□ -0.25
MACF1-230ENST00000530275 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.254e-9■□□□□ 10.1
MACF1-230ENST00000530275 MBD5Q9P267 1494 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 C2orf81A6NN90 581 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 ALBP02768 609 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 PSMA4P25789 261 aaKnown RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 ANXA11P50995 505 aaKnown RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 C10orf53Q8N6V4 93 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 SYN2Q92777 582 aaPredicted RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 CNBD2Q96M20 576 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 SLITRK1Q96PX8 696 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 FRMD8Q9BZ67 464 aaPredicted RBP13.46□□□□□ -0.25
MACF1-230ENST00000530275 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
MACF1-230ENST00000530275 UBTFL6P0CB48 400 aaPredicted RBP13.46□□□□□ -0.26
MACF1-230ENST00000530275 CYP2B6P20813 491 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 COPAP53621 1224 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 SLC16A1P53985 500 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 FUT11Q495W5 492 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 CAPN10Q9HC96 672 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 NMRK1Q9NWW6 199 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 ZNF609O15014 1411 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 PREX2Q70Z35 1606 aa13.46□□□□□ -0.26
MACF1-230ENST00000530275 KDM6BO15054 1643 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 ITGB3P05106 788 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 PHKG1Q16816 387 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 AGAP9Q5VTM2 703 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 CENPLQ8N0S6 344 aaPredicted RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 KRT78Q8N1N4 520 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 RIT2Q99578 217 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 PI4K2AQ9BTU6 479 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 TET3O43151 1660 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 SLC2A3P11169 496 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 MAPK1P28482 360 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 PRIM2P49643 509 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 CSE1LP55060 971 aaKnown RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 SRLQ86TD4 932 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 CELF4Q9BZC1 486 aaKnown RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 KCNF1Q9H3M0 494 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 SCUBE2Q9NQ36 999 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 PLA2R1Q13018 1463 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 H7C4K7 107 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 DDHD2O94830 711 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 CTCFP49711 727 aaPredicted RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.261e-7■■■■□ 22.1
MACF1-230ENST00000530275 ZNF177Q13360 481 aaPredicted RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 FBXW10Q5XX13 1052 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 ERAP2Q6P179 960 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 UNC45BQ8IWX7 931 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 ERP44Q9BS26 406 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 SLC25A13Q9UJS0 675 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 CYP2C8P10632 490 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 PDHBP11177 359 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 SLC11A2P49281 568 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 SERPINB8P50452 374 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 NUDT2P50583 147 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 EIF2B5Q13144 721 aaKnown RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 ZIM3Q96PE6 472 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 SPACA6W5XKT8 324 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
MACF1-230ENST00000530275 SERPINB1P30740 379 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 STK4Q13043 487 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 TRAF7Q6Q0C0 670 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 KIF2BQ8N4N8 673 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 GPRC5AQ8NFJ5 357 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 FAR2Q96K12 515 aa13.45□□□□□ -0.26
MACF1-230ENST00000530275 TSEN34Q9BSV6 310 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms