RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 TUSC3Q13454 348 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 LACTB2Q53H82 288 aaPredicted RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 GLRA4Q5JXX5 417 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 RNF187Q5TA31 235 aaPredicted RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 CCDC121Q6ZUS5 278 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 CCDC13Q8IYE1 715 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 SYCE1Q8N0S2 351 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 C1orf127Q8N9H9 656 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 GSTCDQ8NEC7 633 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 HELQQ8TDG4 1101 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 TAS1R2Q8TE23 839 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 ZMAT2Q96NC0 199 aaKnown RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 FAM193BQ96PV7 902 aaPredicted RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 INTS2Q9H0H0 1204 aaKnown RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 ZMYND8Q9ULU4 1186 aaPredicted RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 GOLGA6L7A0A1B0GV03 622 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 SART1O43290 800 aaKnown RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 ITGB3P05106 788 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 ACRP10323 421 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 UCHL3P15374 230 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 SYN1P17600 705 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 IBSPP21815 317 aaPredicted RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 TBXAS1P24557 533 aaPredicted RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 CTNNA1P35221 906 aaKnown RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 RNASELQ05823 741 aaKnown RBP15.44■□□□□ 0.06
NR1H3-231ENST00000529540 TCTN1Q2MV58 587 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 ZNF365Q70YC5 407 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 LRRC43Q8N309 656 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 PHOSPHO2Q8TCD6 241 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 HERVK_113Q902F9 699 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 SLC9A7Q96T83 725 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 NEUROG2Q9H2A3 272 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 INPP5FQ9Y2H2 1132 aa15.44■□□□□ 0.06
NR1H3-231ENST00000529540 NCANO14594 1321 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 TTC3P53804 2025 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 ARHGEF37A1IGU5 675 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 ASS1P00966 412 aaKnown RBP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 POLR2BP30876 1174 aaKnown RBP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 EIF3BP55884 814 aaKnown RBP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 JAM2P57087 298 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 RNASE9P60153 205 aaKnown RBP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 GCNT1Q02742 428 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 ARID5AQ03989 594 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 IFT88Q13099 833 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 CLLU1OSQ5K130 101 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 ALKBH5Q6P6C2 394 aaKnown RBP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 TMC3Q7Z5M5 1100 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 TTC39CQ8N584 583 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 LMO3Q8TAP4 145 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 CENPTQ96BT3 561 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 SPAG5Q96R06 1193 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 CNOT10Q9H9A5 744 aaKnown RBP15.43■□□□□ 0.06
NR1H3-231ENST00000529540 KLC4Q9NSK0 619 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 TET1Q8NFU7 2136 aa15.43■□□□□ 0.06
NR1H3-231ENST00000529540 PDCD11Q14690 1871 aaKnown RBP15.42■□□□□ 0.06
NR1H3-231ENST00000529540 ZBBXA8MT70 800 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 KRIT1O00522 736 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 DGKIO75912 1065 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 VNN1O95497 513 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 POMCP01189 267 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 H2AFZP0C0S5 128 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 FGFR1P11362 822 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 SLC9A1P19634 815 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
NR1H3-231ENST00000529540 MFAP3P55082 362 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 YWHAEP62258 255 aaKnown RBP15.42■□□□□ 0.06
NR1H3-231ENST00000529540 NOP14P78316 857 aaKnown RBP15.42■□□□□ 0.06
NR1H3-231ENST00000529540 PPP2R5EQ16537 467 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 SV2CQ496J9 727 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 TMEM240Q5SV17 173 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 H2AFVQ71UI9 128 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 VPS36Q86VN1 386 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 MAGEC3Q8TD91 643 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 TATDN2Q93075 761 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 TLCD1Q96CP7 247 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 TXLNGYQ9BZA5 131 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 SLC40A1Q9NP59 571 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 TUBGCP4Q9UGJ1 667 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 AGAP1Q9UPQ3 857 aa15.42■□□□□ 0.06
NR1H3-231ENST00000529540 F8VZ95 297 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 PIRO00625 290 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 PPFIA2O75334 1257 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 TAF6P49848 677 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 PREPLQ4J6C6 727 aaPredicted RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 ZNF667Q5HYK9 610 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 C16orf59Q7L2K0 433 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 PEX26Q7Z412 305 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 NT5DC3Q86UY8 548 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CCDC50Q8IVM0 306 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 C18orf25Q96B23 403 aaPredicted RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 HES6Q96HZ4 224 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CASD1Q96PB1 797 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 TMEM175Q9BSA9 504 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms