RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 CRY1Q16526 586 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 SDHAF4Q5VUM1 108 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 SLC23A3Q6PIS1 610 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 RAB44Q7Z6P3 723 aaPredicted RBP21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 PDZD3Q86UT5 571 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 CCDC33Q8N5R6 958 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 C2orf15Q8WU43 125 aaKnown RBP21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 EXOC4Q96A65 974 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 BBC3Q96PG8 261 aaPredicted RBP21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 ABI2Q9NYB9 513 aaPredicted RBP21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 MMP17Q9ULZ9 603 aa21.13■□□□□ 0.97
AMBRA1-205ENST00000526606 CDC25AP30304 524 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 TRIM29Q14134 588 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 IL17AQ16552 155 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 ARMCX6Q7L4S7 300 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 SYT12Q8IV01 421 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 SFTPA1Q8IWL2 248 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 LRRC15Q8TF66 581 aa21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 MRPS31Q92665 395 aaKnown RBP21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 MMTAG2Q9BU76 263 aaKnown RBP21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 NUSAP1Q9BXS6 441 aaKnown RBP21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 MAGED2Q9UNF1 606 aaPredicted RBP21.12■□□□□ 0.97
AMBRA1-205ENST00000526606 KALRNO60229 2985 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 MYH11P35749 1972 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 CYB561D2O14569 222 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 XPOTO43592 962 aaKnown RBP21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 NFICP08651 508 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 PAX3P23760 479 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 MATR3P43243 847 aaKnown RBP eCLIP21.11■□□□□ 0.976e-7■■■■□ 20.5
AMBRA1-205ENST00000526606 MESP2Q0VG99 397 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 ST3GAL1Q11201 340 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 SCAPQ12770 1279 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 USP4Q13107 963 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 COL28A1Q2UY09 1125 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 ZC2HC1CQ53FD0 456 aaPredicted RBP21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 TTC38Q5R3I4 469 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 PEAR1Q5VY43 1037 aaPredicted RBP21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 WSCD1Q658N2 575 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 EFCAB13Q8IY85 973 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 ATP2A3Q93084 1043 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 TSPAN18Q96SJ8 248 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 PILRBQ9UKJ0 227 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 APC2O95996 2303 aa21.11■□□□□ 0.97
AMBRA1-205ENST00000526606 ANAPC1Q9H1A4 1944 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 PLXNB3Q9ULL4 1909 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 H0Y626 953 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 TRIM16O95361 564 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 IFNAR2P48551 515 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 ZXDBP98169 803 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 SMARCB1Q12824 385 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 SAFBQ15424 915 aaKnown RBP eCLIP21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 MAP7D1Q3KQU3 841 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 LPCAT2Q7L5N7 544 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 TTC16Q8NEE8 873 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 PI4K2AQ9BTU6 479 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 RPF1Q9H9Y2 349 aaKnown RBP21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 GCNT4Q9P109 453 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 DSEQ9UL01 958 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 ACACAQ13085 2346 aa21.1■□□□□ 0.97
AMBRA1-205ENST00000526606 ATXN2Q99700 1313 aaKnown RBP21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 OGTO15294 1046 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 CSH1P0DML2 217 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 CSH2P0DML3 217 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 ITPKAP23677 461 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 DDR2Q16832 855 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 TTC30AQ86WT1 665 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 THEM5Q8N1Q8 247 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 FAM212AQ96EL1 285 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 MYRFLQ96LU7 910 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 TIPINQ9BVW5 301 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 CPSF3Q9UKF6 684 aaKnown RBP21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 PCDHB5Q9Y5E4 795 aa21.09■□□□□ 0.97
AMBRA1-205ENST00000526606 PCDH15Q96QU1 1955 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 PLXND1Q9Y4D7 1925 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 ASXL3Q9C0F0 2248 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 NPHP3-ACAD11A0A0J9YXS1 232 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 NOL4O94818 638 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 CD59P13987 128 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 SMTNP53814 917 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 NCKAP1LP55160 1127 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 ANKRD1Q15327 319 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 SLC39A4Q6P5W5 647 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 METTL23Q86XA0 190 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 OR2I1PQ8NGU4 316 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 SH3RF2Q8TEC5 729 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 KCNN1Q92952 543 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 PYM1Q9BRP8 204 aaKnown RBP21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 TMEM206Q9H813 350 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 TRPC7Q9HCX4 862 aa21.08■□□□□ 0.97
AMBRA1-205ENST00000526606 A0A0B4J269 797 aa21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 C2orf78A6NCI8 922 aa21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 SGK1O00141 431 aa21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 PRPF40AO75400 957 aaKnown RBP21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 USP17L7P0C7H9 530 aa21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 TOB1P50616 345 aaPredicted RBP21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 KYAT1Q16773 422 aa21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 EMC10Q5UCC4 262 aa21.07■□□□□ 0.96
AMBRA1-205ENST00000526606 ALLCQ8N6M5 410 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms