RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	FSD2	A1L4K1	749 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636		H3BS24	57 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ORC4	O43929	436 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	FOXD2	O60548	495 aa	Predicted RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	CLASP2	O75122	1294 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	KATNA1	O75449	491 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	FGF18	O76093	207 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	RHOBTB3	O94955	611 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	PRNP	P04156	253 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ITGAV	P06756	1048 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ENDOU	P21128	410 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ITGB7	P26010	798 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	TPP2	P29144	1249 aa	Predicted RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	SERPINB3	P29508	390 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	THPO	P40225	353 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	PEX19	P40855	299 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	HTR3A	P46098	478 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	PSMC1	P62191	440 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	UBE3A	Q05086	875 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	C2orf27A	Q580R0	203 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	FAM133B	Q5BKY9	247 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	NXN	Q6DKJ4	435 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	PPP4R3A	Q6IN85	833 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	MMS22L	Q6ZRQ5	1243 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	RASGRP2	Q7LDG7	609 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	SERINC5	Q86VE9	423 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ZNF227	Q86WZ6	799 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	TRIM59	Q8IWR1	403 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	TCEAL8	Q8IYN2	117 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	CLASRP	Q8N2M8	674 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ENAH	Q8N8S7	591 aa	Predicted RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	LRRN4CL	Q8ND94	238 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	CHST13	Q8NET6	341 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	CASP10	Q92851	521 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	BRF1	Q92994	677 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	UBE2F	Q969M7	185 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	CDHR1	Q96JP9	859 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	MYADM	Q96S97	322 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	RPP25	Q9BUL9	199 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	NOL6	Q9H6R4	1146 aa	Known RBP	5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	SLC38A10	Q9HBR0	1119 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	LTB4R2	Q9NPC1	389 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	KMT5A	Q9NQR1	393 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	SLC2A4RG	Q9NR83	387 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	LRP2BP	Q9P2M1	347 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	ODF2L	Q9ULJ1	636 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636	PLAA	Q9Y263	795 aa		5.77	□□□□□ -1.49
PABPC1-223	ENST00000523636		A0A1W2PQU0	124 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	ENO4	A6NNW6	628 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	C4orf47	A7E2U8	309 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	KPNA6	O60684	536 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	ASMTL	O95671	621 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	CEACAM1	P13688	526 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TRIM27	P14373	513 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	AKR1B1	P15121	316 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	EPCAM	P16422	314 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	HOXC8	P31273	242 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TSPAN7	P41732	249 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	CD97	P48960	835 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	GUCY2F	P51841	1108 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TIMM10	P62072	90 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	GSTO1	P78417	241 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	NFKB2	Q00653	900 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	POU4F1	Q01851	419 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	PIN1	Q13526	163 aa	Predicted RBP	5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TCEA2	Q15560	299 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	PTPN14	Q15678	1187 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	C21orf62-AS1	Q17RA5	79 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	KRTAP21-3	Q3LHN1	58 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	FAM102B	Q5T8I3	360 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TSHZ3	Q63HK5	1081 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	CFAP161	Q6P656	301 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TMC5	Q6UXY8	1006 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	RNF111	Q6ZNA4	994 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	OTOP3	Q7RTS5	596 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	DTX1	Q86Y01	620 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	ZNF354C	Q86Y25	554 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	LMNTD2	Q8IXW0	634 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	LSM14A	Q8ND56	463 aa	Known RBP	5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	ADCY4	Q8NFM4	1077 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	AFG1L	Q8WV93	481 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	JPH3	Q8WXH2	748 aa	Predicted RBP	5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TCTN2	Q96GX1	697 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	TCF25	Q9BQ70	676 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	SLF1	Q9BQI6	1058 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	HERPUD2	Q9BSE4	406 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	OSBPL6	Q9BZF3	934 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	SEMA4C	Q9C0C4	833 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	ZSWIM5	Q9P217	1185 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	USP25	Q9UHP3	1055 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	IPP	Q9Y573	584 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	WDR81	Q562E7	1941 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	MYH4	Q9Y623	1939 aa		5.76	□□□□□ -1.49
PABPC1-223	ENST00000523636	COL4A2	P08572	1712 aa		5.75	□□□□□ -1.49
PABPC1-223	ENST00000523636	PABPN1L	A6NDY0	278 aa	Known RBP	5.75	□□□□□ -1.49

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