RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 ICMTO60725 284 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 PPP1R37O75864 691 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 ASMTLO95671 621 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 ZBED1O96006 694 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 HOXD13P35453 343 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 NOVP48745 357 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 JAG1P78504 1218 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 FCRLBQ6BAA4 426 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 SH3GL2Q99962 352 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 SDHAF3Q9NRP4 125 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 TNFRSF10BO14763 440 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 MEIS2O14770 477 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CETN3O15182 167 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 AKAP3O75969 853 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 GCNT3O95395 438 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CYP17A1P05093 508 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 MYL3P08590 195 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CCND1P24385 295 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 PBLDP30039 288 aaPredicted RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 ZC2HC1CQ53FD0 456 aaPredicted RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 ZNF565Q8N9K5 539 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CCDC63Q8NA47 563 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 RUSC1Q9BVN2 902 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 BTBD7Q9P203 1132 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 PCP4L1A6NKN8 68 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 PSMA4P25789 261 aaKnown RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 CBLBQ13191 982 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 ZYXQ15942 572 aaKnown RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 CERKLQ49MI3 558 aaPredicted RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 MAEAQ7L5Y9 396 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 NPAS4Q8IUM7 802 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 OR2W6PQ8NHA6 318 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
DENND3-221ENST00000523308 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
DENND3-221ENST00000523308 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
DENND3-221ENST00000523308 EML1O00423 815 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 RAD51CO43502 376 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 IDH3BO43837 385 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 CUL1Q13616 776 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 GIT2Q14161 759 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SF3B4Q15427 424 aaKnown RBP eCLIP13.1□□□□□ -0.31
DENND3-221ENST00000523308 C21orf62-AS1Q17RA5 79 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
DENND3-221ENST00000523308 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 PMEPA1Q969W9 287 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 GANQ9H2C0 597 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
DENND3-221ENST00000523308 SSU72P8A0A1W2PR75 194 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 PJA2O43164 708 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 HSF2BPO75031 334 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 FKBP9O95302 570 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 RETP07949 1114 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
DENND3-221ENST00000523308 PTGS2P35354 604 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 ZNF76P36508 570 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
DENND3-221ENST00000523308 CRKP46108 304 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SERPINB4P48594 390 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 PTPN5P54829 565 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 ACY1Q03154 408 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 NAB2Q15742 525 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SPRED3Q2MJR0 410 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 RUFY4Q6ZNE9 571 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SEPT12Q8IYM1 358 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SCYL3Q8IZE3 742 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.1□□□□□ -0.31
DENND3-221ENST00000523308 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 TAF1LQ8IZX4 1826 aa13.1□□□□□ -0.31
DENND3-221ENST00000523308 ZSCAN5BA6NJL1 495 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 VWA5AO00534 786 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 SULT1B1O43704 296 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 POU2F1P14859 743 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 UCHL3P15374 230 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 PCK1P35558 622 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 CASP2P42575 452 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 ARFIP2P53365 341 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 EPHB4P54760 987 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 CLUL1Q15846 466 aa13.09□□□□□ -0.31
DENND3-221ENST00000523308 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
DENND3-221ENST00000523308 CYP4V2Q6ZWL3 525 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms