RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 THAP12O43422 761 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 LSM8O95777 96 aaKnown RBP10.05□□□□□ -0.8
CLN8-203ENST00000518780 SETSIPP0DME0 302 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 SRGAP2BP0DMP2 458 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 ACAT1P24752 427 aaKnown RBP10.05□□□□□ -0.8
CLN8-203ENST00000518780 CA8P35219 290 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 IRS1P35568 1242 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 CLCN4P51793 760 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 CDR2Q01850 454 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 KLHL30Q0D2K2 578 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 PLD1Q13393 1074 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 PTPN21Q16825 1174 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 DUSP6Q16828 381 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 MDH1BQ5I0G3 518 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 CYP26C1Q6V0L0 522 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 TMEM184AQ6ZMB5 413 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 SLC47A2Q86VL8 602 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 FUKQ8N0W3 1084 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 TC2NQ8N9U0 490 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 EPS8L1Q8TE68 723 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 STK32AQ8WU08 396 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 SMARCD1Q96GM5 515 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 PCED1BQ96HM7 432 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 PDLIM2Q96JY6 352 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 C8orf48Q96LL4 319 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 DUSP16Q9BY84 665 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 MIS12Q9H081 205 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 DPEP3Q9H4B8 488 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 CSNK1G1Q9HCP0 422 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 EHD2Q9NZN4 543 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 HMGXB4Q9UGU5 601 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLN8-203ENST00000518780 SCN1AP35498 2009 aa10.05□□□□□ -0.8
CLN8-203ENST00000518780 MTMR11A4FU01 709 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 SOX1O00570 391 aaPredicted RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 TRIM66O15016 1216 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 TGM5O43548 720 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 NRDCO43847 1150 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 ATP2C2O75185 946 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 PAPLNO95428 1278 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 POU2F2P09086 479 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 HNRNPA1P09651 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLN8-203ENST00000518780 FAM200BP0CF97 657 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 HAPLN1P10915 354 aaPredicted RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 NPR3P17342 541 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 RPL17P18621 184 aaKnown RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 FECHP22830 423 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 HOXA9P31269 272 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 BCAT1P54687 386 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 ARPP19P56211 112 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 PSMC1P62191 440 aaKnown RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 ADCY1Q08828 1119 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 RNF19BQ6ZMZ0 732 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 FAM35AQ86V20 835 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 TMTC1Q8IUR5 882 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 EFHBQ8N7U6 833 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 C12orf29Q8N999 325 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 TMEM35BQ8NCS4 154 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 SLC22A17Q8WUG5 538 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 AUTS2Q8WXX7 1259 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 TFAP2BQ92481 460 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 MYLPFQ96A32 169 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 LRCH3Q96II8 777 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 NOX5Q96PH1 765 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 TMEM209Q96SK2 561 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 AGPAT1Q99943 283 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 MED10Q9BTT4 135 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 B3GNT5Q9BYG0 378 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 RHOBTB2Q9BYZ6 727 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 PDCL3Q9H2J4 239 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 PRDM12Q9H4Q4 367 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 DMAP1Q9NPF5 467 aaPredicted RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 DZANK1Q9NVP4 752 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 COMMD8Q9NX08 183 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 NOCTQ9UK39 431 aaKnown RBP10.04□□□□□ -0.8
CLN8-203ENST00000518780 FBXW11Q9UKB1 542 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 TSPAN16Q9UKR8 245 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 ASB3Q9Y575 518 aa10.04□□□□□ -0.8
CLN8-203ENST00000518780 PRRG1O14668 218 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
CLN8-203ENST00000518780 ADAM12O43184 909 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 HCRTO43612 131 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 AP1G2O75843 785 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 OR4Q2P0C623 313 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 GZMAP12544 262 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 HOXB8P17481 243 aaPredicted RBP10.03□□□□□ -0.8
CLN8-203ENST00000518780 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 BRD2P25440 801 aaKnown RBP10.03□□□□□ -0.8
CLN8-203ENST00000518780 CDH5P33151 784 aaPredicted RBP10.03□□□□□ -0.8
CLN8-203ENST00000518780 ACADSBP45954 432 aa10.03□□□□□ -0.8
CLN8-203ENST00000518780 ALDH1A3P47895 512 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms