RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MBTPS2O43462 519 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 SLC34A2O95436 690 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 SERPINC1P01008 464 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 ACO1P21399 889 aaKnown RBP12.66□□□□□ -0.38
SNF8-215ENST00000515572 TFF2Q03403 129 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 UBXN1Q04323 297 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 TWF1Q12792 350 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
SNF8-215ENST00000515572 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 IQCEQ6IPM2 695 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 PTCRAQ6ISU1 281 aaPredicted RBP12.66□□□□□ -0.38
SNF8-215ENST00000515572 RRAGAQ7L523 313 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 TTC9BQ8N6N2 239 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 UBR7Q8N806 425 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 SUSD6Q92537 303 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 ZNF707Q96C28 371 aaPredicted RBP12.66□□□□□ -0.38
SNF8-215ENST00000515572 APOL5Q9BWW9 433 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 SIX2Q9NPC8 291 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 KIAA1257Q9ULG3 409 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 CNTN6Q9UQ52 1028 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 USP15Q9Y4E8 981 aaPredicted RBP12.66□□□□□ -0.38
SNF8-215ENST00000515572 ASB3Q9Y575 518 aa12.66□□□□□ -0.38
SNF8-215ENST00000515572 GREB1Q4ZG55 1949 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 TRIM66O15016 1216 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 CCL16O15467 120 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 PAEPP09466 180 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 CYP2F1P24903 491 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 RAD23BP54727 409 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 ZNF394Q53GI3 561 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 TMEM270Q6UE05 265 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 ITIH5Q86UX2 942 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNF8-215ENST00000515572 LEMD2Q8NC56 503 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 KAT5Q92993 513 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 SMARCD1Q96GM5 515 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 ZNF512Q96ME7 567 aaPredicted RBP12.65□□□□□ -0.38
SNF8-215ENST00000515572 HEXIM2Q96MH2 286 aaKnown RBP12.65□□□□□ -0.38
SNF8-215ENST00000515572 KREMEN1Q96MU8 473 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 ASB2Q96Q27 587 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 TWNKQ96RR1 684 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 MED10Q9BTT4 135 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 LSM14BQ9BX40 385 aaKnown RBP12.65□□□□□ -0.38
SNF8-215ENST00000515572 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
SNF8-215ENST00000515572 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
SNF8-215ENST00000515572 PATJQ8NI35 1801 aa12.65□□□□□ -0.39
SNF8-215ENST00000515572 A0A1B0GTH6 734 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 VDRP11473 427 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 PTPN2P17706 415 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 ATF6P18850 670 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 BDNFP23560 247 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 ANXA13P27216 316 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 GRIK1P39086 918 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 FANCCQ00597 558 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 ORC1Q13415 861 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
SNF8-215ENST00000515572 CCDC142Q17RM4 750 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 ARHGAP17Q68EM7 881 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 FUKQ8N0W3 1084 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 C12orf29Q8N999 325 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 RBBP8NLQ8NC74 664 aaPredicted RBP12.64□□□□□ -0.39
SNF8-215ENST00000515572 SLC2A14Q8TDB8 520 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 PSMG2Q969U7 264 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 PCMTD1Q96MG8 357 aaPredicted RBP12.64□□□□□ -0.39
SNF8-215ENST00000515572 HNRNPABQ99729 332 aaKnown RBP12.64□□□□□ -0.39
SNF8-215ENST00000515572 LPIN3Q9BQK8 851 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 WDR6Q9NNW5 1121 aaKnown RBP12.64□□□□□ -0.39
SNF8-215ENST00000515572 FAM49BQ9NUQ9 324 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 CEP72Q9P209 647 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 DNAJC12Q9UKB3 198 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 SIK3Q9Y2K2 1263 aa12.64□□□□□ -0.39
SNF8-215ENST00000515572 NOTCH4Q99466 2003 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 ZNF197O14709 1029 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 SOAT2O75908 522 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 FGF19O95750 216 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 FAM200BP0CF97 657 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 CSH1P0DML2 217 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 CSH2P0DML3 217 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 KRT5P13647 590 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 CCDC130P13994 396 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 UCHL3P15374 230 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 KCNQ1P51787 676 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 CDR1P51861 262 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 ZNF132P52740 706 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 SYCP1Q15431 976 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 STILQ15468 1287 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 ARHGAP44Q17R89 818 aa12.63□□□□□ -0.39
SNF8-215ENST00000515572 SGO2Q562F6 1265 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms