RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 SPACA7Q96KW9 195 aa12.79□□□□□ -0.36
CSF1R-208ENST00000515239 SLC22A12Q96S37 553 aa12.79□□□□□ -0.36
CSF1R-208ENST00000515239 BHMT2Q9H2M3 363 aa12.79□□□□□ -0.36
CSF1R-208ENST00000515239 PLEKHA5Q9HAU0 1116 aa12.79□□□□□ -0.36
CSF1R-208ENST00000515239 UBQLN1Q9UMX0 589 aaKnown RBP12.79□□□□□ -0.36
CSF1R-208ENST00000515239 PTPRBP23467 1997 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 A0A087WV48 116 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 SGK1O00141 431 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 TK2O00142 265 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 TOM1L1O75674 476 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 CYP11A1P05108 521 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 CXCL8P10145 99 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 PLA2G2AP14555 144 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 KRT2P35908 639 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 IFNAR2P48551 515 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
CSF1R-208ENST00000515239 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 EFCAB13Q8IY85 973 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 DEFB119Q8N690 84 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 TXNDC5Q8NBS9 432 aaKnown RBP12.78□□□□□ -0.36
CSF1R-208ENST00000515239 LRRC15Q8TF66 581 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 MRPS31Q92665 395 aaKnown RBP12.78□□□□□ -0.36
CSF1R-208ENST00000515239 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 POLMQ9NP87 494 aaPredicted RBP12.78□□□□□ -0.36
CSF1R-208ENST00000515239 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
CSF1R-208ENST00000515239 LACTBL1A8MY62 500 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 BTBD18B2RXH4 712 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 CBFA2T3O75081 653 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 TADA3O75528 432 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 CLTAP09496 248 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 ODC1P11926 461 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 MESP2Q0VG99 397 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 SCRN1Q12765 414 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 BYSLQ13895 437 aaKnown RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 EMC10Q5UCC4 262 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 TOGARAM2Q6ZUX3 1019 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 STKLD1Q8NE28 680 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 C2orf15Q8WU43 125 aaKnown RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 UBL7Q96S82 380 aaPredicted RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 NTPCRQ9BSD7 190 aaKnown RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 KMT5AQ9NQR1 393 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 MAGED2Q9UNF1 606 aaPredicted RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.77□□□□□ -0.37
CSF1R-208ENST00000515239 PLXND1Q9Y4D7 1925 aa12.77□□□□□ -0.37
CSF1R-208ENST00000515239 OBSL1O75147 1896 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 AP5Z1O43299 807 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 CDC45O75419 566 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 CDKL5O76039 1030 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 CTDNEP1O95476 244 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 KLF8O95600 359 aaPredicted RBP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 ADRB2P07550 413 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 SYPP08247 313 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 FDPSP14324 419 aaKnown RBP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 MUTP22033 750 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 GPR15P49685 360 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 IRX6P78412 446 aaPredicted RBP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 MCL1Q07820 350 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 SMARCB1Q12824 385 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 USP4Q13107 963 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 LARP1BQ659C4 914 aaKnown RBP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 TMPRSS7Q7RTY8 843 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 GLRX5Q86SX6 157 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 SCUBE3Q8IX30 993 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 TTC16Q8NEE8 873 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 SPPL2BQ8TCT7 592 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 HMGB4Q8WW32 186 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 TMEM206Q9H813 350 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
CSF1R-208ENST00000515239 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSF1R-208ENST00000515239 TRABD2BA6NFA1 517 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 PIRO00625 290 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 SLC16A4O15374 487 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 CLDN3O15551 220 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 KALRNO60229 2985 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 ADAM23O75077 832 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 HIP1RO75146 1068 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 USP17L7P0C7H9 530 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 ANK1P16157 1881 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 PAX3P23760 479 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 MCM7P33993 719 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 TIE1P35590 1138 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 TNFSF9P41273 254 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 KIR2DL1P43626 348 aaPredicted RBP12.75□□□□□ -0.37
CSF1R-208ENST00000515239 SLC6A11P48066 632 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 RPL6Q02878 288 aaKnown RBP12.75□□□□□ -0.37
CSF1R-208ENST00000515239 CYP4F3Q08477 520 aa12.75□□□□□ -0.37
CSF1R-208ENST00000515239 MAPK7Q13164 816 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms