RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 EIF2B2P49770 351 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 KLRC3Q07444 240 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 PPIDQ08752 370 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 STYK1Q6J9G0 422 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 MICALL2Q8IY33 904 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 H2AFY2Q9P0M6 372 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 APPL1Q9UKG1 709 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 PNPLA7Q6ZV29 1317 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 EVPLLA8MZ36 301 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 RGS7P49802 495 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 AQP5P55064 265 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 ANGPT1Q15389 498 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 SNRNP35Q16560 246 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 TNIP2Q8NFZ5 429 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 NEDD1Q8NHV4 660 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 GANCQ8TET4 914 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 CAVIN3Q969G5 261 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 PPP2R3CQ969Q6 453 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 HIST1H2AHQ96KK5 128 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 GCNAQ96QF7 691 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 H2AFJQ9BTM1 129 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 SULT1E1P49888 294 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 WASHC2DQ5SRD0 308 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 TTC30BQ8N4P2 665 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 SGF29Q96ES7 293 aa13.82□□□□□ -0.2
TCOF1-214ENST00000515035 PAIP1Q9H074 479 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 DDX18Q9NVP1 670 aaKnown RBP13.82□□□□□ -0.2
TCOF1-214ENST00000515035 SUPT3HB4E1H0 165 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 KIAA0391O15091 583 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 FAM58BPP0C7Q3 252 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 FDPSP14324 419 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 FBXW4P57775 412 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 TP53BP2Q13625 1128 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 SCARF1Q14162 830 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 SMTNL2Q2TAL5 461 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ELOA2Q8IYF1 753 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 IGDCC4Q8TDY8 1250 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ADGRA2Q96PE1 1338 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 CDC42EP4Q9H3Q1 356 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 NDUFS3O75489 264 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 GRK2P25098 689 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 SOX6P35712 828 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 TTLL4Q14679 1199 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ZBTB49Q6ZSB9 765 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 SCFD2Q8WU76 684 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 TRAPPC9Q96Q05 1148 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 LACRTQ9GZZ8 138 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 THAP2Q9H0W7 228 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 LATS2Q9NRM7 1088 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 METTL5Q9NRN9 209 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 CNOT7Q9UIV1 285 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ACOT2P49753 483 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ARMCX4Q5H9R4 360 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ARHGAP17Q68EM7 881 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 CALML6Q8TD86 181 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 TMEM120AQ9BXJ8 343 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 DAPK2Q9UIK4 370 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 GTF3C4Q9UKN8 822 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 PCDHA10Q9Y5I2 948 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 GLRA3O75311 464 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 SMNDC1O75940 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 CSPG5O95196 566 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 ARIH2O95376 493 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 NCOA4Q13772 614 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 PKN3Q6P5Z2 889 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 EFL1Q7Z2Z2 1120 aaKnown RBP13.81□□□□□ -0.2
TCOF1-214ENST00000515035 BNIPLQ7Z465 357 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 EPS8L2Q9H6S3 715 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 PRDM4Q9UKN5 801 aa13.81□□□□□ -0.2
TCOF1-214ENST00000515035 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 KRT87PA6NCN2 255 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 TSC22D2O75157 780 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
TCOF1-214ENST00000515035 KCTD21Q4G0X4 260 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 CCDC149Q6ZUS6 474 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 HACL1Q9UJ83 578 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 MYCP01106 439 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-214ENST00000515035 APOA4P06727 396 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 ATG4AQ8WYN0 398 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 THUMPD3Q9BV44 507 aaKnown RBP13.8□□□□□ -0.2
TCOF1-214ENST00000515035 CD274Q9NZQ7 290 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 SAC3D1A6NKF1 404 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 CHRNB3Q05901 458 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 FOXR1Q6PIV2 292 aa13.8□□□□□ -0.2
TCOF1-214ENST00000515035 ZCCHC7Q8N3Z6 543 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms