RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ITGA2BP08514 1039 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 ITGA5P08648 1049 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 SRGAP2BP0DMP2 458 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 MED14OSP0DP75 135 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 JUPP14923 745 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 EGR1P18146 543 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 KLRK1P26718 216 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 AKT1P31749 480 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 VIPR2P41587 438 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 TOB1P50616 345 aaPredicted RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 PRKAA2P54646 552 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 SLURP1P55000 103 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 MC2RQ01718 297 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 FOXO1Q12778 655 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 GRM7Q14831 915 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 IQCB1Q15051 598 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 FAXCQ5TGI0 409 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 TAF2Q6P1X5 1199 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 LAYNQ6UX15 382 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 ARHGEF18Q6ZSZ5 1173 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 KIAA0408Q6ZU52 694 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 DOK3Q7L591 496 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 KRT28Q7Z3Y7 464 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 TAX1BP1Q86VP1 789 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 HEATR4Q86WZ0 1026 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 C2CD5Q86YS7 1000 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 CCDC117Q8IWD4 279 aaPredicted RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 ZFPM1Q8IX07 1006 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 FTSJ3Q8IY81 847 aaKnown RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 LINC01356Q8N9X3 169 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 PSD4Q8NDX1 1056 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 PPHLN1Q8NEY8 458 aaKnown RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 CPT1CQ8TCG5 803 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 SMCR8Q8TEV9 937 aaPredicted RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 SKA1Q96BD8 255 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 ZSWIM1Q9BR11 485 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 USP40Q9NVE5 1235 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 VSX1Q9NZR4 365 aaPredicted RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 LPAR3Q9UBY5 353 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 ZNF69Q9UC07 566 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 SRP68Q9UHB9 627 aaKnown RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 HPSEQ9Y251 543 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 MTO1Q9Y2Z2 717 aaKnown RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 CCDC78A2IDD5 438 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 TISP43B9A030 160 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 DNPH1O43598 174 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 TRIM13O60858 407 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 COQ9O75208 318 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 ACTL6BO94805 426 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 XRCC6P12956 609 aaKnown RBP eCLIP4.25□□□□□ -1.73
CALD1-224ENST00000498254 NPPBP16860 134 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 RXRAP19793 462 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 BDNFP23560 247 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 MSX2P35548 267 aaPredicted RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 PRKAG1P54619 331 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 WNT3P56703 355 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 IRX6P78412 446 aaPredicted RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 PIGFQ07326 219 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 KIAA2012Q0VF49 1180 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 DDX10Q13206 875 aaKnown RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 TBX2Q13207 712 aaPredicted RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 CUL4BQ13620 913 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 NPY5RQ15761 445 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 MAPKAPK3Q16644 382 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 INSCQ1MX18 579 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 BTBD16Q32M84 506 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 MGAT5BQ3V5L5 792 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 NT5DC1Q5TFE4 455 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 TSHZ3Q63HK5 1081 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 ARL6IP4Q66PJ3 421 aaKnown RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 GPRIN1Q7Z2K8 1008 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 TICAM2Q86XR7 235 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 SYT12Q8IV01 421 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 NAXEQ8NCW5 288 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 DNAJB14Q8TBM8 379 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 BPIFB1Q8TDL5 484 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 CSGALNACT1Q8TDX6 532 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 AFG1LQ8WV93 481 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 TMEM171Q8WVE6 324 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 ASB12Q8WXK4 309 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 ST8SIA2Q92186 375 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 USP13Q92995 863 aaPredicted RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 GRAMD1AQ96CP6 724 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 BORCS6Q96GS4 357 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 LRIG1Q96JA1 1093 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 MOGAT1Q96PD6 335 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 SENP7Q9BQF6 1050 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 MESP1Q9BRJ9 268 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 TAF1DQ9H5J8 278 aaPredicted RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 KIF17Q9P2E2 1029 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 FEM1BQ9UK73 627 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 SHOC2Q9UQ13 582 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.25□□□□□ -1.73
CALD1-224ENST00000498254 SH3BP1Q9Y3L3 701 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 RAD54BQ9Y620 910 aa4.25□□□□□ -1.73
CALD1-224ENST00000498254 LEFTY2O00292 366 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms