RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 KIAA0895LQ68EN5 471 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 CHST15Q7LFX5 561 aaPredicted RBP5.91□□□□□ -1.46
SSR3-209ENST00000498205 SLC44A3Q8N4M1 653 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 NSUN7Q8NE18 718 aaKnown RBP5.91□□□□□ -1.46
SSR3-209ENST00000498205 FAM46DQ8NEK8 389 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 PPP1R35Q8TAP8 253 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 CAGE1Q8TC20 777 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 MRGPRX1Q96LB2 322 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 SPATA5L1Q9BVQ7 753 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 HESX1Q9UBX0 185 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 AGAP1Q9UPQ3 857 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 SHOC2Q9UQ13 582 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 ABCA8O94911 1581 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 KIAA1107Q9UPP5 1409 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 ISM1B1AKI9 464 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 PRPF3O43395 683 aaKnown RBP5.9□□□□□ -1.46
SSR3-209ENST00000498205 DNAJB5O75953 348 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 UNC5CO95185 931 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 ZBED1O96006 694 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
SSR3-209ENST00000498205 GRPP07492 148 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 RPL17P18621 184 aaKnown RBP5.9□□□□□ -1.46
SSR3-209ENST00000498205 ATF3P18847 181 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 GATA3P23771 443 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 GCLCP48506 637 aaPredicted RBP5.9□□□□□ -1.46
SSR3-209ENST00000498205 INHBEP58166 350 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 FAM193AP78312 1265 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 RAB32Q13637 225 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 HLTFQ14527 1009 aaKnown RBP eCLIP5.9□□□□□ -1.46
SSR3-209ENST00000498205 SF3B3Q15393 1217 aaKnown RBP5.9□□□□□ -1.46
SSR3-209ENST00000498205 PPP4R4Q6NUP7 873 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 TAF2Q6P1X5 1199 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 SLC30A10Q6XR72 485 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 FMNL3Q8IVF7 1028 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 TTC17Q96AE7 1141 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 LRIG1Q96JA1 1093 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 TRIM54Q9BYV2 358 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 VSX1Q9NZR4 365 aaPredicted RBP5.9□□□□□ -1.46
SSR3-209ENST00000498205 CPA4Q9UI42 421 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 TMX2Q9Y320 296 aa5.9□□□□□ -1.46
SSR3-209ENST00000498205 CCDC7Q96M83 1385 aa5.9□□□□□ -1.47
SSR3-209ENST00000498205 PZPP20742 1482 aa5.9□□□□□ -1.47
SSR3-209ENST00000498205 CAMSAP2Q08AD1 1489 aa5.9□□□□□ -1.47
SSR3-209ENST00000498205 ABCC10Q5T3U5 1492 aa5.9□□□□□ -1.47
SSR3-209ENST00000498205 KIF14Q15058 1648 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 EN2P19622 333 aaPredicted RBP5.89□□□□□ -1.47
SSR3-209ENST00000498205 PROZP22891 400 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 CD6P30203 668 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 LRPAP1P30533 357 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 ARFIP2P53365 341 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 MC2RQ01718 297 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 FOXI1Q12951 378 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 CNN3Q15417 329 aaKnown RBP5.89□□□□□ -1.47
SSR3-209ENST00000498205 SMN1Q16637 294 aaKnown RBP5.89□□□□□ -1.47
SSR3-209ENST00000498205 DARS2Q6PI48 645 aaKnown RBP5.89□□□□□ -1.47
SSR3-209ENST00000498205 SLC30A5Q8TAD4 765 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 TTC8Q8TAM2 541 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 ACTRT2Q8TDY3 377 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 ANKS1AQ92625 1134 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 CCDC136Q96JN2 1154 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 AGAP2Q99490 1192 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 DPH1Q9BZG8 443 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 ZMAT3Q9HA38 289 aaKnown RBP5.89□□□□□ -1.47
SSR3-209ENST00000498205 ZSCAN32Q9NX65 697 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 XPR1Q9UBH6 696 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 TPCN1Q9ULQ1 816 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 ANKRD30AQ9BXX3 1397 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 MAST1Q9Y2H9 1570 aa5.89□□□□□ -1.47
SSR3-209ENST00000498205 VSTM5A8MXK1 200 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 TBC1D4O60343 1298 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 MGEA5O60502 916 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 HMGB1P09429 215 aaKnown RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 PPP3CBP16298 524 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 TYRP1P17643 537 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 PPIFP30405 207 aaKnown RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 CXCR5P32302 372 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 ADRA1BP35368 520 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 PXNP49023 591 aaPredicted RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 ZNF169Q14929 603 aaPredicted RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 POLD3Q15054 466 aaPredicted RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 ICE2Q659A1 982 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 KAZNQ674X7 775 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 WDR75Q8IWA0 830 aaKnown RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 FAM109AQ8N4B1 249 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 PCSK9Q8NBP7 692 aaKnown RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 IL31RAQ8NI17 732 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 NELL1Q92832 810 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 TSR2Q969E8 191 aaKnown RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 FAM136AQ96C01 138 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 FBXL20Q96IG2 436 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 TPSD1Q9BZJ3 242 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 KLC4Q9NSK0 619 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 GEMIN8Q9NWZ8 242 aaKnown RBP5.88□□□□□ -1.47
SSR3-209ENST00000498205 OBP2AQ9NY56 170 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 STAP2Q9UGK3 403 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 INSL6Q9Y581 213 aa5.88□□□□□ -1.47
SSR3-209ENST00000498205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.88□□□□□ -1.472e-9■□□□□ 10.7
SSR3-209ENST00000498205 ZBED9Q6R2W3 1325 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms