RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 FNTBP49356 437 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 RUNX3Q13761 415 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 E2F4Q16254 413 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 DDR2Q16832 855 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 CFAP221Q4G0U5 840 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 FUBP3Q96I24 572 aaKnown RBP eCLIP27.88■■■□□ 2.05
RNF220-216ENST00000488865 FOXD4L1Q9NU39 408 aa27.88■■■□□ 2.05
RNF220-216ENST00000488865 SPTLC2O15270 562 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 AMPD3Q01432 767 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 SOWAHAQ2M3V2 549 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 SDHAF4Q5VUM1 108 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 LIMS2Q7Z4I7 341 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 SPATA2LQ8IUW3 424 aaPredicted RBP27.87■■■□□ 2.05
RNF220-216ENST00000488865 TRIM9Q9C026 710 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 KIAA1586Q9HCI6 787 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 HPS4Q9NQG7 708 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 USP18Q9UMW8 372 aa27.87■■■□□ 2.05
RNF220-216ENST00000488865 ZNF638Q14966 1978 aaKnown RBP27.87■■■□□ 2.05
RNF220-216ENST00000488865 MED19A0JLT2 244 aaPredicted RBP27.86■■■□□ 2.05
RNF220-216ENST00000488865 EIF3DO15371 548 aaKnown RBP eCLIP27.86■■■□□ 2.05
RNF220-216ENST00000488865 HRO43593 1189 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 TNNC2P02585 160 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 RETP07949 1114 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 DMWDQ09019 674 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 SIM2Q14190 667 aaPredicted RBP27.86■■■□□ 2.05
RNF220-216ENST00000488865 DUOXA2Q1HG44 320 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 TMEM196Q5HYL7 178 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 CC2D1AQ6P1N0 951 aaPredicted RBP27.86■■■□□ 2.05
RNF220-216ENST00000488865 CNNM4Q6P4Q7 775 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 FAM171BQ6P995 826 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 PRR23BQ6ZRT6 265 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 STKLD1Q8NE28 680 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 GLIS3Q8NEA6 775 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 OR5B17Q8NGF7 314 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 HPDLQ96IR7 371 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 ZNF396Q96N95 335 aaPredicted RBP27.86■■■□□ 2.05
RNF220-216ENST00000488865 PARD6AQ9NPB6 346 aa27.86■■■□□ 2.05
RNF220-216ENST00000488865 LRP3O75074 770 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 TADA3O75528 432 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 HOXD13P35453 343 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 MAGEA11P43364 429 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 AMPD2Q01433 879 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 LPAL2Q16609 132 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 LMBRD2Q68DH5 695 aaPredicted RBP27.85■■■□□ 2.05
RNF220-216ENST00000488865 CBWD2Q8IUF1 395 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 HPS3Q969F9 1004 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 BACH2Q9BYV9 841 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 EBF3Q9H4W6 596 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 C2orf42Q9NWW7 574 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 HSPBP1Q9NZL4 362 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 PTPRJQ12913 1337 aa27.85■■■□□ 2.05
RNF220-216ENST00000488865 TRDMT1O14717 391 aaKnown RBP27.84■■■□□ 2.05
RNF220-216ENST00000488865 GRSF1Q12849 480 aaKnown RBP eCLIP27.84■■■□□ 2.05
RNF220-216ENST00000488865 PDGFRLQ15198 375 aa27.84■■■□□ 2.05
RNF220-216ENST00000488865 TRIM68Q6AZZ1 485 aa27.84■■■□□ 2.05
RNF220-216ENST00000488865 C4orf50Q6ZRC1 276 aa27.84■■■□□ 2.05
RNF220-216ENST00000488865 EPM2AIP1Q7L775 607 aaPredicted RBP27.84■■■□□ 2.05
RNF220-216ENST00000488865 WDR49Q8IV35 697 aa27.84■■■□□ 2.05
RNF220-216ENST00000488865 IQUBQ8NA54 791 aa27.84■■■□□ 2.05
RNF220-216ENST00000488865 ZNF507Q8TCN5 953 aa27.84■■■□□ 2.05
RNF220-216ENST00000488865 OTOL1A6NHN0 477 aaPredicted RBP27.83■■■□□ 2.05
RNF220-216ENST00000488865 YEATS4O95619 227 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 FAM160A1Q05DH4 1040 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 CCDC142Q17RM4 750 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 HEATR6Q6AI08 1181 aaKnown RBP27.83■■■□□ 2.05
RNF220-216ENST00000488865 WDR5BQ86VZ2 330 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 RIN3Q8TB24 985 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 CHFRQ96EP1 664 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 TFIP11Q9UBB9 837 aaKnown RBP27.83■■■□□ 2.05
RNF220-216ENST00000488865 CDV3Q9UKY7 258 aaKnown RBP27.83■■■□□ 2.05
RNF220-216ENST00000488865 CDH9Q9ULB4 789 aa27.83■■■□□ 2.05
RNF220-216ENST00000488865 HCRTO43612 131 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 CUTAO60888 179 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 ATXN1P54253 815 aaKnown RBP27.82■■■□□ 2.04
RNF220-216ENST00000488865 ASIC1P78348 528 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 SPEM2Q0P670 501 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 MAPRE1Q15691 268 aaKnown RBP27.82■■■□□ 2.04
RNF220-216ENST00000488865 FSTL4Q6MZW2 842 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 SCN4BQ8IWT1 228 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 FSIP1Q8NA03 581 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 KBTBD7Q8WVZ9 684 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 DHX58Q96C10 678 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 CEP295NLQ96MC4 621 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 SYT15Q9BQS2 421 aa27.82■■■□□ 2.04
RNF220-216ENST00000488865 TRAV19A0A0A6YYK7 116 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 ATG13O75143 517 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 ATP2C2O75185 946 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 USP17L7P0C7H9 530 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 ARSAP15289 507 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 WARSP23381 471 aaKnown RBP27.81■■■□□ 2.04
RNF220-216ENST00000488865 LMO2P25791 158 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 SNRPFP62306 86 aaKnown RBP27.81■■■□□ 2.04
RNF220-216ENST00000488865 SRSF5Q13243 272 aaKnown RBP27.81■■■□□ 2.04
RNF220-216ENST00000488865 MTF1Q14872 753 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 FAM26FQ5R3K3 315 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 VSTM1Q6UX27 236 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 C7orf25Q9BPX7 421 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 TRPC7Q9HCX4 862 aa27.81■■■□□ 2.04
RNF220-216ENST00000488865 MAGEC2Q9UBF1 373 aaPredicted RBP27.81■■■□□ 2.04
RNF220-216ENST00000488865 SNRNP35Q16560 246 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms